Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene99040 SustainPine v3.0 584
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RLP7_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.443e-16
Putative N-terminus
sp_v3.0_unigene99308 SustainPine v3.0 1136
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At3g49720; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene100325 SustainPine v3.0 424
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U572_VITVI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene101592 SustainPine v3.0 658
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Arabidopsis RepID=G3PB_ARATH 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 5.186e-33
C-terminus
sp_v3.0_unigene101904 SustainPine v3.0 523
AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.445e-38
Internal
sp_v3.0_unigene102147 SustainPine v3.0 314
AutoFact: ACT domain-containing protein [Arabidopsis thaliana] emb|CAB86016.1| putative protein [Arabidopsis thaliana] dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana] gb|AAL62393.1| putative protein [Arabidopsis thaliana] gb|AAM48021.1| putative prot 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102331 SustainPine v3.0 941
AutoFact: Allene oxide synthase protein n=1 Tax=Lonicera japonica RepID=A1X873_LONJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Allene oxide synthase 0.0
Putative C-terminus
sp_v3.0_unigene103115 SustainPine v3.0 654
AutoFact: putative plastid-lipid-associated protein 12 [Arabidopsis thaliana] sp|Q8LAP6.1|PAP12_ARATH RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic; AltName: Full=Fibrillin-12; Flags: Precursor gb|AAM65225.1| unknown [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene103756 SustainPine v3.0 521
AutoFact: peroxin 6 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 6.697e-13
Internal
sp_v3.0_unigene103956 SustainPine v3.0 281
AutoFact: DnaJ homologue n=1 Tax=Pisum sativum RepID=P92424_PEA 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein dnaJ 9.803e-07
Internal
sp_v3.0_unigene104304 SustainPine v3.0 641
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAC43219.1| unknown protein [Arabidopsis thaliana] gb|AAP37677.1| At1g78915 [Arabidopsis thaliana] gb|AEE36174.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104453 SustainPine v3.0 499
AutoFact: FK506 binding protein, putative n=1 Tax=Ricinus communis RepID=B9T2M5_RICCO 4.0e-06
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FK506 binding protein 2.34e-08
N-terminus
sp_v3.0_unigene105506 SustainPine v3.0 208
AutoFact: Putative lipoxygenase [Oryza sativa Japonica Group] 1.0e-22
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene105760 SustainPine v3.0 261
AutoFact: chloroplast copper-translocating HMA8 P-ATPase [Glycine max] 5.0e-27
FL-Next: sp=Copper-transporting ATPase PAA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene106510 SustainPine v3.0 320
AutoFact: putative Rubisco activase 2 [Arabidopsis thaliana] gb|AAK32846.1|AF361834_1 At1g73110/F3N23_39 [Arabidopsis thaliana] gb|AAL77745.1| At1g73110/F3N23_39 [Arabidopsis thaliana] dbj|BAC43522.1| unknown protein [Arabidopsis thaliana] gb|AEE35415.1| putative R 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107460 SustainPine v3.0 417
AutoFact: mitochondrial intermediate peptidase [Arabidopsis thaliana] gb|AED96095.1| mitochondrial intermediate peptidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene108137 SustainPine v3.0 627
AutoFact: Major facilitator superfamily n=1 Tax=Medicago truncatula RepID=A2Q643_MEDTR 0.0
FL-Next: sp=Organic cation/carnitine transporter 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene108338 SustainPine v3.0 494
AutoFact: Glutamine synthetase n=1 Tax=Suillus bovinus RepID=GLNA_SUIBO 0.0
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene108624 SustainPine v3.0 255
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative n=1 Tax=Ricinus communis RepID=B9SYC0_RICCO 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protein ftsH, putative 2.805e-14
Internal
sp_v3.0_unigene108673 SustainPine v3.0 548
AutoFact: Carbonic anhydrase, chloroplastic n=2 Tax=Triticeae RepID=CAHC_HORVU 0.0
FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain