Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75637 SustainPine v3.0 187
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 5.727e-31
Internal
sp_v3.0_unigene75695 SustainPine v3.0 284
• AutoFact: thioredoxin m [Chlamydomonas reinhardtii] sp|P23400.3|TRXM_CHLRE RecName: Full=Thioredoxin M-type, chloroplastic; Short=Trx-M; AltName: Full=Thioredoxin-CH2; Flags: Precursor emb|CAA56851.1| thioredoxin m [Chlamydomonas reinhardtii] gb|EDP10052.1| thiored 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin m 1.097e-27
Putative C-terminus
sp_v3.0_unigene75706 SustainPine v3.0 145
• AutoFact: Highly similar to ribulose-1,5-bisphosphate carboxylase/oxygenase activase n=1 Tax=Arabidopsis thaliana RepID=Q9SSL6_ARATH 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75920 SustainPine v3.0 393
• AutoFact: CLC-e chloride channel protein [Arabidopsis thaliana] 2.0e-36
• FL-Next: sp=Chloride channel protein CLC-e; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Voltage-gated clc-type chloride channel, putative 2.023e-08
Internal
sp_v3.0_unigene76077 SustainPine v3.0 293
• AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76160 SustainPine v3.0 304
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase subunit A2 [Physcomitrella patens] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase 5.47e-16
Putative C-terminus
sp_v3.0_unigene76164 SustainPine v3.0 297
• AutoFact: Carbonic anhydrase n=3 Tax=Picea sitchensis RepID=A9NSY6_PICSI 1.0e-38
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Carbonic anhydrase 0.0
Internal
sp_v3.0_unigene76193 SustainPine v3.0 345
• AutoFact: Phosphoribulokinase, chloroplastic n=3 Tax=Chlamydomonadales RepID=KPPR_CHLRE 1.0e-10
• FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoribulokinase 6.955e-23
C-terminus
sp_v3.0_unigene76295 SustainPine v3.0 154
• AutoFact: Light-harvesting chlorphyll binding protein 3 (Fragment) n=1 Tax=Solenostemon scutellarioides RepID=C9VWR2_SOLSC 3.0e-16
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.249e-13
Putative C-terminus
sp_v3.0_unigene76312 SustainPine v3.0 331
• AutoFact: Ferritin n=1 Tax=Solanum tuberosum RepID=A7UGG8_SOLTU 1.0e-23
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Putative Complete
sp_v3.0_unigene76655 SustainPine v3.0 268
• AutoFact: [S] COG0718 Uncharacterized protein conserved in bacteria 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene76703 SustainPine v3.0 206
• AutoFact: Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 5.573e-21
Putative C-terminus
sp_v3.0_unigene76790 SustainPine v3.0 273
• AutoFact: Cell division protein ftsh (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6MZA7_ORYSI 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc dependent protease 1.991e-08
C-terminus
sp_v3.0_unigene76876 SustainPine v3.0 244
• AutoFact: Calmodulin-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RU57_RICCO 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77028 SustainPine v3.0 223
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTR6_PICSI 2.0e-24
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 1.247e-17
Internal
sp_v3.0_unigene77150 SustainPine v3.0 174
• AutoFact: Phosphoribulokinase (Fragment) n=1 Tax=Picea abies RepID=Q3ZDJ0_PICAB 1.0e-14
• FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoribulokinase 1.089e-39
Putative C-terminus
sp_v3.0_unigene77399 SustainPine v3.0 393
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.078e-21
C-terminus
sp_v3.0_unigene77406 SustainPine v3.0 160
• AutoFact: Chloroplast light-harvesting complex II protein Lhcbm3 n=1 Tax=Bigelowiella natans RepID=Q9LE97_BIGNA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.957e-16
Internal
sp_v3.0_unigene77452 SustainPine v3.0 317
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 5.659e-34
Internal
sp_v3.0_unigene77466 SustainPine v3.0 232
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II core complex proteins psbY 5.925e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain