Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51190 SustainPine v3.0 284
• AutoFact: histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp|Q9M364.2|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3 3.0e-16
• FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Trithorax, putative 3.223e-09
Internal
sp_v3.0_unigene51226 SustainPine v3.0 645
• AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 0.0
• FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein HIRA 3.176e-13
N-terminus
sp_v3.0_unigene51973 SustainPine v3.0 487
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H0P7_POPTR 1.0e-23
• FL-Next: Isoform 2 of SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D 0.0
Internal
sp_v3.0_unigene52076 SustainPine v3.0 131
• AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 3.0e-19
• FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: p300/CBP acetyltransferase-related protein 1.895e-08
Internal
sp_v3.0_unigene52123 SustainPine v3.0 291
• AutoFact: p300/CBP acetyltransferase-related protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAD6_PHYPA 9.0e-16
• FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
• Sma3: p300/CBP acetyltransferase-related protein 7.399e-09
C-terminus
sp_v3.0_unigene52184 SustainPine v3.0 101
• AutoFact: Histone acetyltransferase HAC12 n=1 Tax=Arabidopsis thaliana RepID=F4I4I8_ARATH 6.0e-09
• FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
• Sma3: p300/CBP acetyltransferase-related protein 1.963e-08
Internal
sp_v3.0_unigene52289 SustainPine v3.0 372
• AutoFact: Probable histone-arginine methyltransferase CARM1 n=3 Tax=Oryza sativa RepID=CARM1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 3.137e-07
Internal
sp_v3.0_unigene52446 SustainPine v3.0 273
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene52483 SustainPine v3.0 273
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 4.0e-20
• FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52584 SustainPine v3.0 282
• AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 4.0e-20
• FL-Next: sp=Actin-related protein 7; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Actin-related protein ARP7 1.318e-09
Internal
sp_v3.0_unigene52869 SustainPine v3.0 322
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene52961 SustainPine v3.0 244
• AutoFact: Amine oxidase, putative n=1 Tax=Ricinus communis RepID=B9SUC7_RICCO 2.0e-18
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein LSD1-LIKE 2 1.284e-08
Internal
sp_v3.0_unigene54267 SustainPine v3.0 177
• FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 5.542e-07
Internal
sp_v3.0_unigene56591 SustainPine v3.0 102
• AutoFact: Putative DNA repair protein n=1 Tax=Ipomoea trifida RepID=Q6JJ38_IPOTF 5.0e-11
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA repair helicase rad5,16, putative 2.361e-07
Internal
sp_v3.0_unigene56871 SustainPine v3.0 247
• AutoFact: Histone acetyltransferase (Fragment) n=1 Tax=Triticum aestivum RepID=Q7XYD0_WHEAT 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone acetyltransferase 9.378e-07
Internal
sp_v3.0_unigene57054 SustainPine v3.0 210
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SCR1_RICCO 7.0e-28
• FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein HIRA 1.76e-13
Internal
sp_v3.0_unigene60329 SustainPine v3.0 346
• AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 2.0e-33
• FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein HIRA 1.76e-13
Internal
sp_v3.0_unigene60393 SustainPine v3.0 343
• AutoFact: SET domain protein n=1 Tax=Triticum aestivum RepID=Q6GV25_WHEAT 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61316 SustainPine v3.0 197
• AutoFact: SET domain-containing protein (ISS) [Ostreococcus tauri] emb|CAL53729.1| SET domain-containing protein (ISS) [Ostreococcus tauri] 1.0e-09
• FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 1.148e-06
Internal
sp_v3.0_unigene62007 SustainPine v3.0 204
• AutoFact: Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 n=2 Tax=Arabidopsis RepID=SUVH2_ARATH 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain