Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8552 SustainPine v3.0 1600
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 9.128e-19
C-terminus
sp_v3.0_unigene8738 SustainPine v3.0 3010
AutoFact: Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 n=3 Tax=Arabidopsis RepID=SM3L1_ARATH 0.0
FL-Next: tr=SNF2 domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Chromatin remodeling complex subunit 2.356e-11
Complete
sp_v3.0_unigene8743 SustainPine v3.0 690
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 1.96182e-44
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 1.34e-08
C-terminus
sp_v3.0_unigene8936 SustainPine v3.0 924
AutoFact: histone-lysine N-methyltransferase ATXR6 [Arabidopsis thaliana] sp|Q9FNE9.1|ATXR6_ARATH RecName: Full=Histone-lysine N-methyltransferase ATXR6; AltName: Full=Protein SET DOMAIN GROUP 34; AltName: Full=Trithorax-related protein 6; Short=TRX-related protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase ATXR6, putative 6.584e-09
N-terminus
sp_v3.0_unigene9064 SustainPine v3.0 642
AutoFact: histon acetyltransferase HAT1 [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 1.549e-09
C-terminus
sp_v3.0_unigene9287 SustainPine v3.0 272
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.00386e-43
FL-Next: sp=Histone acetyltransferase HAC12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 1.397e-08
Internal
sp_v3.0_unigene10765 SustainPine v3.0 888
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 4.915e-17
Putative C-terminus
sp_v3.0_unigene11754 SustainPine v3.0 2147
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 6.216e-06
Complete
sp_v3.0_unigene11816 SustainPine v3.0 641
AutoFact: Histone acetyltransferase HAC1 n=4 Tax=Arabidopsis RepID=HAC1_ARATH 7.0e-30
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 7.399e-09
C-terminus
sp_v3.0_unigene12793 SustainPine v3.0 960
AutoFact: actin-related protein 6 [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 6 1.657e-16
N-terminus
sp_v3.0_unigene13171 SustainPine v3.0 1515
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: sp=Actin-related protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Actin-related protein ARP7 1.114e-09
Complete
sp_v3.0_unigene13313 SustainPine v3.0 539
AutoFact: transcription cofactor, putative; K04498 E1A/CREB-binding protein [EC:2.3.1.48] 2.0e-15
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 5.167e-09
C-terminus
sp_v3.0_unigene13588 SustainPine v3.0 2778
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: tr=Os07g0602200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone deacetylase 2.484e-14
Complete
sp_v3.0_unigene13924 SustainPine v3.0 949
AutoFact: RecName: Full=Histone-lysine N-methyltransferase ASHH2; AltName: Full=ASH1 homolog 2; AltName: Full=H3-K4-HMTase; AltName: Full=Histone H3-K36 methyltransferase 8; Short=H3-K36-HMTase 8; AltName: Full=Protein EARLY FLOWERING IN SHORT DAYS; AltName: Full=P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 4.218e-13
Putative C-terminus
sp_v3.0_unigene14392 SustainPine v3.0 1234
AutoFact: Histone-lysine N-methyltransferase SUVR3 n=2 Tax=Andropogoneae RepID=B6TYP5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase SUVR3 3.506e-09
Complete
sp_v3.0_unigene14968 SustainPine v3.0 2035
AutoFact: histone acetyltransferase protein HAC108 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 6.133e-28
Putative Complete
sp_v3.0_unigene15652 SustainPine v3.0 550
AutoFact: p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: Histone acetyltransferase 8.981e-14
Internal
sp_v3.0_unigene16303 SustainPine v3.0 1107
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T847_RICCO 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 9.146e-30
Complete
sp_v3.0_unigene17278 SustainPine v3.0 501
AutoFact: Trypan_PARP multi-domain protein 3.0e-16
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 2.657e-20
coding
sp_v3.0_unigene18036 SustainPine v3.0 874
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain