Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene105091 SustainPine v3.0 484
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 5.0e-29
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 5.379e-09
Putative C-terminus
sp_v3.0_unigene105495 SustainPine v3.0 207
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 9.0e-15
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.514e-08
Internal
sp_v3.0_unigene105601 SustainPine v3.0 426
AutoFact: Histone chaperone n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2F4_PHYPA 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone chaperone 1.307e-16
Putative C-terminus
sp_v3.0_unigene105627 SustainPine v3.0 284
AutoFact: Histone-lysine N-methyltransferase ATXR4 n=2 Tax=Arabidopsis RepID=ATXR4_ARATH 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene105743 SustainPine v3.0 412
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 6.216e-06
Internal
sp_v3.0_unigene106474 SustainPine v3.0 154
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDS5_POPTR 4.0e-21
FL-Next: sp=Histone-lysine N-methyltransferase ATX4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.538e-08
Internal
sp_v3.0_unigene107628 SustainPine v3.0 405
AutoFact: Trypan_PARP multi-domain protein 4.0e-13
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 9.326e-12
coding
sp_v3.0_unigene107663 SustainPine v3.0 291
AutoFact: Histone-lysine N-methyltransferase ATXR6, putative n=1 Tax=Ricinus communis RepID=B9RU15_RICCO 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 1.024e-09
C-terminus
sp_v3.0_unigene107816 SustainPine v3.0 268
AutoFact: SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ [Medicago truncatula] 5.0e-25
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.462e-08
Internal
sp_v3.0_unigene107858 SustainPine v3.0 438
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 5.387e-14
Internal
sp_v3.0_unigene107974 SustainPine v3.0 524
AutoFact: Histone deacetylase RPD3/HDA1 class II n=3 Tax=Triticeae RepID=C1IC96_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 3.488e-14
Internal
sp_v3.0_unigene108339 SustainPine v3.0 264
AutoFact: histone methyltransferase [Arabidopsis thaliana] sp|O22781.1|SUVH2_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; AltName: Full=Cytosine-HMTase 2; AltName: Full=H3-K27-HMTase 2; 2.0e-23
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 5.82e-08
Internal
sp_v3.0_unigene108832 SustainPine v3.0 693
AutoFact: Transcription initiation factor tfiid, putative n=1 Tax=Ricinus communis RepID=B9S9F7_RICCO 6.0e-15
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone acetyltransferase 1.512e-06
N-terminus
sp_v3.0_unigene110901 SustainPine v3.0 449
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene111111 SustainPine v3.0 243
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I5A8_POPTR 3.0e-27
FL-Next: sp=Histone-lysine N-methyltransferase ATX4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.362e-08
Internal
sp_v3.0_unigene112916 SustainPine v3.0 455
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 3.0e-10
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 3 2.783e-09
C-terminus
sp_v3.0_unigene113313 SustainPine v3.0 511
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T847_RICCO 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.383e-26
Putative N-terminus
sp_v3.0_unigene114518 SustainPine v3.0 277
AutoFact: putative actin protein [Arabidopsis thaliana] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 6 1.155e-16
Putative N-terminus
sp_v3.0_unigene115191 SustainPine v3.0 312
FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118092 SustainPine v3.0 171
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 3.0e-11
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.273e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain