Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene95799 SustainPine v3.0 725
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N2W3_POPTR 8.00001e-42
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene96522 SustainPine v3.0 615
AutoFact: SET domain protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IDM7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase ATXR6, putative 6.584e-09
Internal
sp_v3.0_unigene97639 SustainPine v3.0 204
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 6.086e-10
Internal
sp_v3.0_unigene97712 SustainPine v3.0 798
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 7.131e-14
Internal
sp_v3.0_unigene98510 SustainPine v3.0 359
AutoFact: histone deacetylase, putative [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class II RPD3 type histone deacetylase protein 1.468e-08
Internal
sp_v3.0_unigene98538 SustainPine v3.0 542
AutoFact: LOB domain-containing protein 18 [Arabidopsis thaliana] sp|O22131.2|LBD18_ARATH RecName: Full=LOB domain-containing protein 18; AltName: Full=ASYMMETRIC LEAVES 2-like protein 20; Short=AS2-like protein 20 gb|AAL38036.1|AF447891_1 LOB DOMAIN 18 [Arabidopsi 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.4013e-45
N-terminus
sp_v3.0_unigene99105 SustainPine v3.0 529
AutoFact: SNF2 domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MP52_ARALL 6.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.435e-07
C-terminus
sp_v3.0_unigene99157 SustainPine v3.0 301
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os02g0621100 protein 8.285e-06
C-terminus
sp_v3.0_unigene99701 SustainPine v3.0 575
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RPN1_RICCO 3.0e-31
FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 3.765e-07
Internal
sp_v3.0_unigene99965 SustainPine v3.0 649
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein ARP7 9.88e-10
C-terminus
sp_v3.0_unigene101469 SustainPine v3.0 299
AutoFact: Actin-related protein 6 n=5 Tax=Camelineae RepID=ARP6_ARATH 1.0e-15
FL-Next: sp=Actin-related protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Actin-related protein 6 2.099e-12
C-terminus
sp_v3.0_unigene102833 SustainPine v3.0 722
AutoFact: histone-lysine N-methyltransferase ATX1 [Arabidopsis thaliana] sp|Q9C5X4.2|ATX1_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX1; AltName: Full=Protein SET DOMAIN GROUP 27; AltName: Full=Trithorax-homolog protein 1; Short=TRX-homolog protein 1 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Sma3: SET domain protein 4.007e-13
Internal
sp_v3.0_unigene102887 SustainPine v3.0 741
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.21e-07
Internal
sp_v3.0_unigene103439 SustainPine v3.0 368
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone acetyltransferase 2.336e-11
Internal
sp_v3.0_unigene103811 SustainPine v3.0 507
AutoFact: histone-lysine N-methyltransferase ATX5 [Arabidopsis thaliana] sp|Q8GZ42.1|ATX5_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX5; AltName: Full=Protein SET DOMAIN GROUP 29; AltName: Full=Trithorax-homolog protein 5; Short=TRX-homolog protein 5 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.538e-08
Internal
sp_v3.0_unigene103859 SustainPine v3.0 427
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
Internal
sp_v3.0_unigene104424 SustainPine v3.0 576
AutoFact: SET domain histone methyltransferase SUVH4 [Arabidopsis thaliana] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104436 SustainPine v3.0 367
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 9.0e-32
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 1.361e-07
Internal
sp_v3.0_unigene104474 SustainPine v3.0 520
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.361e-07
Internal
sp_v3.0_unigene104522 SustainPine v3.0 253
AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 5.0e-31
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain