Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: shade avoidance

Term: GO:0009641  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene94951 SustainPine v3.0 1152
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX27; AltName: Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain transcription factor HOX27; AltName: Full=OsHox27 dbj|BAD17827.1| putative homeobox-leucine zipper protein [Oryza sativa Japonica Group] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 8.097e-17
Complete
sp_v3.0_unigene102704 SustainPine v3.0 397
AutoFact: homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana] sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 dbj|BAE99427.1| homeobox protein [Ara 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 6.902e-17
C-terminus
sp_v3.0_unigene106227 SustainPine v3.0 409
AutoFact: putative COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP1 regulatory protein 1.256e-11
Putative N-terminus
sp_v3.0_unigene106556 SustainPine v3.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 7.641e-14
Putative N-terminus
sp_v3.0_unigene126156 SustainPine v3.0 384
AutoFact: homeobox-leucine zipper protein [Glycine max] 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.601e-17
Internal
sp_v3.0_unigene126339 SustainPine v3.0 291
AutoFact: HD domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ03_MALDO 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein ATHB-4 1.298e-16
Internal
sp_v3.0_unigene130650 SustainPine v3.0 358
AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein HAT14 7.184e-11
C-terminus
sp_v3.0_unigene132447 SustainPine v3.0 339
AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein ATHB-4 1.57e-16
Putative C-terminus
sp_v3.0_unigene140658 SustainPine v3.0 236
AutoFact: Homeodomain leucine-zipper 1 n=1 Tax=Nicotiana benthamiana RepID=C6FFS4_NICBE 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.174e-14
Internal
sp_v3.0_unigene142508 SustainPine v3.0 352
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX1; AltName: Full=HD-ZIP protein HOX1; AltName: Full=Homeodomain transcription factor HOX1; AltName: Full=OsHox1 gb|AAF19980.1|AF211193_1 homeodomain-leucine zipper transcription factor [Oryza sativa Indica 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 7.004e-17
Putative C-terminus
sp_v3.0_unigene167396 SustainPine v3.0 307
AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 4.983e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain