Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152234 SustainPine v3.0 362
• AutoFact: putative Glycine-rich protein 2 [Oryza sativa Japonica Group] dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group] gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group] gb|ACD13288.1| cold shock domain protei 1.0e-17
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Cold-shock protein with RNA binding domain 4.714e-08
Putative N-terminus
sp_v3.0_unigene152637 SustainPine v3.0 506
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae RIB40] 2.0e-17
• FL-Next: tr=Glycine-rich RNA-binding protein; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: Glycine-rich RNA-binding protein 1.586e-36
N-terminus
sp_v3.0_unigene152803 SustainPine v3.0 318
• AutoFact: PREDICTED: ribosomal protein L23a-like [Bos taurus] 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 1.967e-10
C-terminus
sp_v3.0_unigene152805 SustainPine v3.0 517
• AutoFact: Heat shock protein Hsp70 family protein n=1 Tax=Polysphondylium pallidum RepID=D3BE43_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 4.887e-37
C-terminus
sp_v3.0_unigene152852 SustainPine v3.0 320
• AutoFact: 60S acidic ribosomal protein P2 n=22 Tax=Eutheria RepID=RLA2_HUMAN 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P2 2.253e-11
Putative Complete
sp_v3.0_unigene153260 SustainPine v3.0 491
• AutoFact: 70 kDa heat shock protein 2 n=2 Tax=Rhizopus stolonifer RepID=Q8J1Y0_RHIST 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 6.50623e-42
C-terminus
sp_v3.0_unigene153377 SustainPine v3.0 407
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
N-terminus
sp_v3.0_unigene153410 SustainPine v3.0 343
• AutoFact: Peroxiredoxin-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NRD5_PHYIT 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 5.988e-16
Internal
sp_v3.0_unigene153422 SustainPine v3.0 485
• AutoFact: Chaperonin CPN60-1, mitochondrial n=3 Tax=rosids RepID=CH61_CUCMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: groEL protein 5.715e-38
Internal
sp_v3.0_unigene153722 SustainPine v3.0 405
• AutoFact: PREDICTED: peroxiredoxin-4-like n=1 Tax=Acyrthosiphon pisum RepID=UPI000179332E 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 6.444e-16
C-terminus
sp_v3.0_unigene153736 SustainPine v3.0 549
• AutoFact: Phosphoglycerate kinase (Fragment) n=4 Tax=Formicidae RepID=E9IUG2_SOLIN 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Internal
sp_v3.0_unigene153791 SustainPine v3.0 322
• AutoFact: ribosomal protein L24, putative [Oryza sativa Japonica Group] gb|EAY79967.1| hypothetical protein OsI_35131 [Oryza sativa Indica Group] gb|EAZ17457.1| hypothetical protein OsJ_32984 [Oryza sativa Japonica Group] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Putative C-terminus
sp_v3.0_unigene153869 SustainPine v3.0 276
• AutoFact: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=5 Tax=Nostocaceae RepID=Q3MBJ0_ANAVT 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 4.895e-16
Internal
sp_v3.0_unigene153943 SustainPine v3.0 441
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Putative N-terminus
sp_v3.0_unigene154177 SustainPine v3.0 387
• AutoFact: PREDICTED: similar to peroxiredoxins, prx-1, prx-2, prx-3 [Tribolium castaneum] gb|EFA05664.1| hypothetical protein TcasGA2_TC014929 [Tribolium castaneum] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 5.419e-16
C-terminus
sp_v3.0_unigene154254 SustainPine v3.0 281
• AutoFact: DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FH88_FLAJ1 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.818e-11
Internal
sp_v3.0_unigene154341 SustainPine v3.0 418
• AutoFact: PREDICTED: phosphoglucomutase 1 isoform 2 n=1 Tax=Taeniopygia guttata RepID=UPI000194CD42 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PGM 8.953e-33
Putative C-terminus
sp_v3.0_unigene154392 SustainPine v3.0 380
• AutoFact: 60S ribosomal protein l26 n=1 Tax=Lycosa singoriensis RepID=A9QQ76_LYCSI 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 3.66e-11
Putative C-terminus
sp_v3.0_unigene154469 SustainPine v3.0 209
• AutoFact: PREDICTED: thioredoxin-dependent peroxide reductase-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA27F 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 4.13e-16
Internal
sp_v3.0_unigene154486 SustainPine v3.0 470
• AutoFact: Hsp90 protein n=4 Tax=Tetrahymena RepID=Q22W82_TETTH 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain