Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene147696 SustainPine v3.0 448
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 2.0e-37
FL-Next: sp=Catalase isozyme 2; Ricinus communis (Castor bean). 0.0
Sma3: Catalase 0.0
Internal
sp_v3.0_unigene147697 SustainPine v3.0 778
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
N-terminus
sp_v3.0_unigene147698 SustainPine v3.0 720
AutoFact: Catalase n=3 Tax=Prunus RepID=A1Z1Z6_PRUAV 2.0e-30
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147700 SustainPine v3.0 842
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147702 SustainPine v3.0 535
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
C-terminus
sp_v3.0_unigene147703 SustainPine v3.0 590
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147861 SustainPine v3.0 520
AutoFact: Sucrose synthase n=1 Tax=Pinus halepensis RepID=Q5Y2E7_PINHA 7.0e-28
FL-Next: tr=Sucrose synthase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Sucrose synthase 0.0
Putative N-terminus
sp_v3.0_unigene148026 SustainPine v3.0 306
AutoFact: Phosphoglycerate mutase (Fragment) n=1 Tax=Nicotiana attenuata RepID=A1BQW7_9SOLA 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1.691e-10
Internal
sp_v3.0_unigene148328 SustainPine v3.0 475
AutoFact: sucrose synthase 2 [Arabidopsis thaliana] gb|AED95780.1| sucrose synthase 2 [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sucrose synthase 0.0
Putative Complete
sp_v3.0_unigene148403 SustainPine v3.0 494
AutoFact: Cyclin-dependent kinase B2-2 n=2 Tax=Arabidopsis RepID=CKB22_ARATH 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase 1.724e-13
C-terminus
sp_v3.0_unigene148927 SustainPine v3.0 317
AutoFact: Beta-amylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SR20_PHYPA 5.0e-38
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-amylase 0.0
Internal
sp_v3.0_unigene149051 SustainPine v3.0 236
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 5.0e-24
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
Internal
sp_v3.0_unigene149590 SustainPine v3.0 116
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 4.0e-13
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
Internal
sp_v3.0_unigene149623 SustainPine v3.0 238
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 7.0e-28
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
Internal
sp_v3.0_unigene149928 SustainPine v3.0 327
AutoFact: Calmodulin-like protein 7 n=2 Tax=Arabidopsis RepID=CML7_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin-like protein 3.011e-06
C-terminus
sp_v3.0_unigene150117 SustainPine v3.0 326
AutoFact: Proteasome subunit alpha 3 (T01 family) n=1 Tax=Schistosoma mansoni RepID=C1M0C4_SCHMA 2.0e-16
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 9.8e-18
C-terminus
sp_v3.0_unigene150258 SustainPine v3.0 312
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S5, chloroplastic 1.586e-31
Putative C-terminus
sp_v3.0_unigene150264 SustainPine v3.0 388
AutoFact: heat shock protein GroEL n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36B2 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperonin-60kD, ch60, putative 7.491e-11
Internal
sp_v3.0_unigene150308 SustainPine v3.0 439
AutoFact: Phosphoglucomutase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BW65_9EUKA 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGM 2.309e-21
C-terminus
sp_v3.0_unigene150310 SustainPine v3.0 381
AutoFact: peroxiredoxin 4 [synthetic construct] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiol-specific antioxidant protein 3.6e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain