Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145690 SustainPine v3.0 243
• AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-18
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene145781 SustainPine v3.0 1209
• AutoFact: xyloglucan endotransglucosylase [Beta vulgaris subsp. vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 5.389e-32
C-terminus
sp_v3.0_unigene145905 SustainPine v3.0 316
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 2.0e-23
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Sucrose synthase 0.0
C-terminus
sp_v3.0_unigene145925 SustainPine v3.0 698
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 7.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 1.695e-34
Misassembled
sp_v3.0_unigene145962 SustainPine v3.0 567
• AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative xyloglucan endotransglycosylase 1.462e-17
N-terminus
sp_v3.0_unigene145973 SustainPine v3.0 1232
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 2.667e-33
Complete
sp_v3.0_unigene146019 SustainPine v3.0 217
• AutoFact: Ribosomal_60s multi-domain protein 2.0e-15
• Sma3: 60S acidic ribosomal protein P1, putative 5.124e-08
coding
sp_v3.0_unigene146180 SustainPine v3.0 1024
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-36
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene146251 SustainPine v3.0 293
• AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 5.0e-32
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene146264 SustainPine v3.0 1657
• AutoFact: HSP70 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.757e-37
Misassembled
sp_v3.0_unigene146266 SustainPine v3.0 895
• AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglucosylase/hydrolase 5.046e-39
C-terminus
sp_v3.0_unigene146284 SustainPine v3.0 576
• AutoFact: Heat shock protein 70 n=3 Tax=Embryophyta RepID=C9WCK6_9MARC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Misassembled
sp_v3.0_unigene146335 SustainPine v3.0 639
• AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 4.249e-37
N-terminus
sp_v3.0_unigene146354 SustainPine v3.0 1038
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 5.60519e-45
Putative Complete
sp_v3.0_unigene146383 SustainPine v3.0 457
• AutoFact: Heat shock protein 70 kDa (Fragment) n=2 Tax=Pseudotsuga RepID=C6FCI5_PSEMZ 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.8026e-45
Internal
sp_v3.0_unigene146398 SustainPine v3.0 949
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 6.067e-39
N-terminus
sp_v3.0_unigene146405 SustainPine v3.0 404
• AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative (EC:2.4.1.207); K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglucosylase/hydrolase 3.102e-19
Putative C-terminus
sp_v3.0_unigene146438 SustainPine v3.0 665
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 6.474e-36
Putative C-terminus
sp_v3.0_unigene146440 SustainPine v3.0 438
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 6.0e-30
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene146445 SustainPine v3.0 363
• AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 2.0e-08
• FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stress-induced hydrophobic peptide 2.647e-24
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain