Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21141 SustainPine v3.0 1075
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 2.0e-22
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene21204 SustainPine v3.0 769
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Internal
sp_v3.0_unigene21210 SustainPine v3.0 487
• AutoFact: Low temperature and salt responsive protein [Arabidopsis thaliana] ref|XP_002881622.1| hypothetical protein ARALYDRAFT_482911 [Arabidopsis lyrata subsp. lyrata] gb|AAK97701.1| unknown protein [Arabidopsis thaliana] gb|AAL31117.1| At2g38901/At2g38901 [Arab 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stress-induced hydrophobic peptide 1.096e-15
Complete
sp_v3.0_unigene21228 SustainPine v3.0 845
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene21264 SustainPine v3.0 963
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 3.116e-39
C-terminus
sp_v3.0_unigene21282 SustainPine v3.0 859
• AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene21316 SustainPine v3.0 972
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene21469 SustainPine v3.0 634
• AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 4.0e-17
• FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stress-induced hydrophobic peptide 7.964e-28
Complete
sp_v3.0_unigene21484 SustainPine v3.0 579
• AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene21537 SustainPine v3.0 566
• AutoFact: plasma membrane protein 3 [Leymus chinensis] 4.0e-15
• FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stress-induced hydrophobic peptide 1.2e-23
Complete
sp_v3.0_unigene21563 SustainPine v3.0 1916
• AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 0.0
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 0.0
Complete
sp_v3.0_unigene21599 SustainPine v3.0 882
• AutoFact: Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI 1.0e-11
• FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stress-induced hydrophobic peptide 1.756e-27
Complete
sp_v3.0_unigene21602 SustainPine v3.0 791
• AutoFact: XET_C multi-domain protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 6.236e-27
C-terminus
sp_v3.0_unigene21606 SustainPine v3.0 533
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.0e-29
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene21864 SustainPine v3.0 567
• AutoFact: Glucose-regulated protein 78, putative n=9 Tax=Trypanosoma RepID=Q384Q5_9TRYP 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.992e-28
C-terminus
sp_v3.0_unigene21865 SustainPine v3.0 552
• AutoFact: RNA-binding protein precursor [Nicotiana tabacum] 2.0e-15
• FL-Next: tr=Glycine-rich RNA-binding protein; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: RNA-binding protein 3.116e-06
N-terminus
sp_v3.0_unigene21920 SustainPine v3.0 461
• AutoFact: Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO 5.0e-37
• FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene22011 SustainPine v3.0 566
• AutoFact: Cationic peroxidase 1, putative n=1 Tax=Ricinus communis RepID=B9SWU3_RICCO 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative peroxidase 3.029e-26
C-terminus
sp_v3.0_unigene22026 SustainPine v3.0 870
• AutoFact: Germin-like protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ32_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Germin-like protein 6.51604e-43
Complete
sp_v3.0_unigene22061 SustainPine v3.0 1028
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CDKC 1.506e-15
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain