|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene168
|
SustainPine v3.0
|
1814
|
|
• AutoFact: tRNA intron endonuclease [Arabidopsis thaliana] dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene195
|
SustainPine v3.0
|
3806
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ
|
8.0e-33
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Glycine-rich RNA-binding protein
|
2.597e-27
|
|
Complete
|
|
sp_v3.0_unigene199
|
SustainPine v3.0
|
2299
|
|
• AutoFact: poly(A)-binding protein [Cucumis sativus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Poly(A)-binding protein
|
6.971e-34
|
|
Complete
|
|
sp_v3.0_unigene241
|
SustainPine v3.0
|
1733
|
|
• AutoFact: pre-mRNA processing factor [Triticum aestivum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Pre-mrna splicing factor
|
4.959e-09
|
|
N-terminus
|
|
sp_v3.0_unigene403
|
SustainPine v3.0
|
1855
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Dead box ATP-dependent RNA helicase, putative
|
4.649e-12
|
|
Putative Complete
|
|
sp_v3.0_unigene1503
|
SustainPine v3.0
|
1488
|
|
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays]
|
0.0
|
|
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene1549
|
SustainPine v3.0
|
3006
|
|
• AutoFact: MAP7 multi-domain protein
|
1.0e-09
|
|
• FL-Next: tr=Os03g0270200 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene1665
|
SustainPine v3.0
|
1273
|
|
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
1.426e-09
|
|
C-terminus
|
|
sp_v3.0_unigene1703
|
SustainPine v3.0
|
1178
|
|
• AutoFact: Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica oleracea]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Peptidyl-tRNA hydrolase, putative
|
8.518e-12
|
|
Complete
|
|
sp_v3.0_unigene1767
|
SustainPine v3.0
|
1981
|
|
• AutoFact: serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gb|AEE79109.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Afc, putative
|
1.098e-15
|
|
Putative Complete
|
|
sp_v3.0_unigene1796
|
SustainPine v3.0
|
1187
|
|
• AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
|
5.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: U1 small nuclear ribonucleoprotein
|
5.633e-12
|
|
Complete
|
|
sp_v3.0_unigene1869
|
SustainPine v3.0
|
2047
|
|
• AutoFact: putative U1 snRNP 70K protein [Trifolium pratense]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: U1 snRNP
|
9.17e-09
|
|
Putative Complete
|
|
sp_v3.0_unigene2109
|
SustainPine v3.0
|
469
|
|
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7E9_RICCO
|
1.4013e-45
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Pentatricopeptide repeat-containing protein, putative
|
2.219e-28
|
|
Internal
|
|
sp_v3.0_unigene2151
|
SustainPine v3.0
|
2937
|
|
• AutoFact: poly(A)-binding protein [Cucumis sativus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Poly(A)-binding protein
|
6.971e-34
|
|
Complete
|
|
sp_v3.0_unigene2373
|
SustainPine v3.0
|
2882
|
|
• AutoFact: Cyclin-dependent kinase G-2 n=4 Tax=Oryza sativa RepID=CDKG2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Cyclin dependent kinase
|
2.947e-13
|
|
C-terminus
|
|
sp_v3.0_unigene2493
|
SustainPine v3.0
|
1993
|
|
• AutoFact: pfam07717, OB_NTP_bind, Oligonucleotide/oligosaccharide-binding (OB)-fold
|
1.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: ATP-dependent RNA helicase, putative
|
1.482e-18
|
|
Putative Complete
|
|
sp_v3.0_unigene2763
|
SustainPine v3.0
|
2135
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Dead box ATP-dependent RNA helicase, putative
|
5.401e-22
|
|
C-terminus
|
|
sp_v3.0_unigene2771
|
SustainPine v3.0
|
1856
|
|
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene3274
|
SustainPine v3.0
|
640
|
|
• AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC
|
1.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Glycine-rich RNA-binding protein
|
6.23199e-41
|
|
N-terminus
|
|
sp_v3.0_unigene3277
|
SustainPine v3.0
|
666
|
|
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
7.054e-10
|
|
Internal
|
