Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA primase activity

Term: GO:0003896  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene147 SustainPine v3.0 2292
AutoFact: DNA polymerase n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MMP0_ARALL 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.052e-14
C-terminus
sp_v3.0_unigene2484 SustainPine v3.0 1298
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 5.732e-20
Internal
sp_v3.0_unigene7194 SustainPine v3.0 2015
AutoFact: DNA primase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TVE8_VITVI 0.0
FL-Next: sp=DNA primase; Vitis vinifera (Grape). 0.0
Sma3: DNA primase 7.127e-41
Complete
sp_v3.0_unigene7235 SustainPine v3.0 1990
AutoFact: DNA primase large subunit [Arabidopsis thaliana] sp|Q84WJ2.2|PRI2_ARATH RecName: Full=Probable DNA primase large subunit gb|AAM61309.1| unknown [Arabidopsis thaliana] gb|AEE34629.1| DNA primase large subunit [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable DNA primase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene31308 SustainPine v3.0 706
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVW3_VITVI 1.0e-20
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 2.179e-06
N-terminus
sp_v3.0_unigene46143 SustainPine v3.0 885
AutoFact: DNA primase [Arabidopsis thaliana] gb|AAU44591.1| hypothetical protein AT5G52800 [Arabidopsis thaliana] gb|AED96262.1| DNA primase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene48324 SustainPine v3.0 455
AutoFact: DNA primase [Arabidopsis thaliana] gb|AED96261.1| DNA primase [Arabidopsis thaliana] 9.0e-32
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal
sp_v3.0_unigene50055 SustainPine v3.0 401
AutoFact: DNA polymerase alpha catalytic subunit n=1 Tax=Arabidopsis thaliana RepID=F4K285_ARATH 1.0e-30
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase alpha catalytic subunit 2.258e-09
Internal
sp_v3.0_unigene52659 SustainPine v3.0 157
AutoFact: DNA primase [Arabidopsis thaliana] gb|AAU44591.1| hypothetical protein AT5G52800 [Arabidopsis thaliana] gb|AED96262.1| DNA primase [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene59919 SustainPine v3.0 338
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 3.0e-24
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.944e-17
Internal
sp_v3.0_unigene63053 SustainPine v3.0 327
AutoFact: DNA polymerase (Fragment) n=2 Tax=Triticum aestivum RepID=D8L9N3_WHEAT 7.0e-39
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene72146 SustainPine v3.0 150
AutoFact: DNA primase n=1 Tax=Ricinus communis RepID=B9RQ40_RICCO 4.0e-14
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: DNA primase 1.509e-12
Internal
sp_v3.0_unigene104028 SustainPine v3.0 470
AutoFact: DNA primase [Arabidopsis thaliana] gb|AAU44591.1| hypothetical protein AT5G52800 [Arabidopsis thaliana] gb|AED96262.1| DNA primase [Arabidopsis thaliana] 9.0e-37
FL-Next: tr=Defensin/CCP-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene108538 SustainPine v3.0 474
AutoFact: DNA primase [Arabidopsis thaliana] gb|AED96261.1| DNA primase [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene130710 SustainPine v3.0 211
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 1.0e-23
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain