Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribonucleoside binding

Term: GO:0032549  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66252 SustainPine v3.0 370
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A5AMN9_VITVI 4.0e-25
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus densiflora (Japanese red pine). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 2.997e-39
Internal
sp_v3.0_unigene69224 SustainPine v3.0 277
• AutoFact: DNA-directed RNA polymerase (Fragment) n=5 Tax=Spermatophyta RepID=A2RQN0_9SPER 2.0e-38
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 1.747e-40
Internal
sp_v3.0_unigene69322 SustainPine v3.0 333
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 1.0e-26
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 7.418e-06
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene74885 SustainPine v3.0 342
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 8.0e-17
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: DNA-directed RNA polymerase 9.633e-11
N-terminus
sp_v3.0_unigene74892 SustainPine v3.0 311
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 8.0e-30
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Internal
sp_v3.0_unigene75117 SustainPine v3.0 293
• AutoFact: RNA polymerase II subunit RPB2 (Fragment) n=20 Tax=Polyporales RepID=Q873T6_9APHY 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 6.215e-30
Internal
sp_v3.0_unigene75439 SustainPine v3.0 176
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis corallina RepID=Q1L5Z7_9MAGN 2.0e-17
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.545e-24
Internal
sp_v3.0_unigene76907 SustainPine v3.0 285
• AutoFact: RNA polymerase II second largest subunit (Fragment) n=1 Tax=Teucrium fruticans RepID=Q6Q254_9LAMI 3.0e-39
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 3.49501e-40
Internal
sp_v3.0_unigene78149 SustainPine v3.0 193
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 3.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 1.324e-14
Internal
sp_v3.0_unigene80757 SustainPine v3.0 186
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 3.0e-16
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 4.457e-06
Internal
sp_v3.0_unigene80919 SustainPine v3.0 157
• AutoFact: putative RNA polymerase III [Oryza sativa Japonica Group] 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase 6.195e-07
Internal
sp_v3.0_unigene96158 SustainPine v3.0 416
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 5.497e-32
Internal
sp_v3.0_unigene99374 SustainPine v3.0 440
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase D subunit 2a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.16e-06
Internal
sp_v3.0_unigene100218 SustainPine v3.0 317
• AutoFact: DNA-directed RNA polymerase n=4 Tax=Solanaceae RepID=Q1L5Z1_SOLLC 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 2.155e-28
Internal
sp_v3.0_unigene101651 SustainPine v3.0 479
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 6.085e-25
C-terminus
sp_v3.0_unigene107823 SustainPine v3.0 402
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 1.371e-20
Internal
sp_v3.0_unigene108173 SustainPine v3.0 201
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 4.0e-14
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene112810 SustainPine v3.0 331
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 4.0e-27
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 1.476e-08
Internal
sp_v3.0_unigene114277 SustainPine v3.0 382
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.99993e-41
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.086e-10
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain