Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase.

Term: EC:2.7.7.6  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76907 SustainPine v3.0 285
• AutoFact: RNA polymerase II second largest subunit (Fragment) n=1 Tax=Teucrium fruticans RepID=Q6Q254_9LAMI 3.0e-39
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 3.49501e-40
Internal
sp_v3.0_unigene78149 SustainPine v3.0 193
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 3.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 1.324e-14
Internal
sp_v3.0_unigene80919 SustainPine v3.0 157
• AutoFact: putative RNA polymerase III [Oryza sativa Japonica Group] 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase 6.195e-07
Internal
sp_v3.0_unigene85223 SustainPine v3.0 352
• AutoFact: Caudal_act multi-domain protein 5.0e-06
• Sma3: DNA-directed RNA polymerase 6.888e-19
coding
sp_v3.0_unigene85291 SustainPine v3.0 323
• AutoFact: Herpes_BLLF1 multi-domain protein 6.0e-09
• Sma3: DNA-directed RNA polymerase 6.813e-20
coding
sp_v3.0_unigene85910 SustainPine v3.0 233
• AutoFact: DUF605 multi-domain protein 2.0e-06
• Sma3: DNA-directed RNA polymerase 1.97e-19
coding
sp_v3.0_unigene96158 SustainPine v3.0 416
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 5.497e-32
Internal
sp_v3.0_unigene99374 SustainPine v3.0 440
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase D subunit 2a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.16e-06
Internal
sp_v3.0_unigene100218 SustainPine v3.0 317
• AutoFact: DNA-directed RNA polymerase n=4 Tax=Solanaceae RepID=Q1L5Z1_SOLLC 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 2.155e-28
Internal
sp_v3.0_unigene101651 SustainPine v3.0 479
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 6.085e-25
C-terminus
sp_v3.0_unigene105032 SustainPine v3.0 422
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GM06_POPTR 2.0e-29
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.94e-11
Internal
sp_v3.0_unigene107823 SustainPine v3.0 402
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 1.371e-20
Internal
sp_v3.0_unigene112810 SustainPine v3.0 331
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 4.0e-27
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 1.476e-08
Internal
sp_v3.0_unigene114277 SustainPine v3.0 382
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.99993e-41
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.086e-10
Putative N-terminus
sp_v3.0_unigene114847 SustainPine v3.0 380
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
• FL-Next: sp=DNA-directed RNA polymerase; Pinus taiwanensis. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 1.032e-34
Internal
sp_v3.0_unigene114970 SustainPine v3.0 626
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene115291 SustainPine v3.0 239
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 5.0e-31
• FL-Next: sp=DNA-directed RNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: DNA-directed RNA polymerase 2.481e-22
Internal
sp_v3.0_unigene116171 SustainPine v3.0 316
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 2.0e-29
• FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: DNA-directed RNA polymerase 4.546e-08
Internal
sp_v3.0_unigene118670 SustainPine v3.0 335
• AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 3.0e-24
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 4.865e-17
Internal
sp_v3.0_unigene120057 SustainPine v3.0 439
• AutoFact: DNA-directed RNA polymerase subunit beta' n=71 Tax=Propionibacterium RepID=RPOC_PROAC 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Halocarpus kirkii. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase subunit beta'' 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain