Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: production of siRNA involved in RNA interference

Term: GO:0030422  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene138 SustainPine v3.0 3993
• AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene7704 SustainPine v3.0 2056
• AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 3.154e-20
C-terminus
sp_v3.0_unigene7962 SustainPine v3.0 2221
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute family member 1.706e-18
C-terminus
sp_v3.0_unigene8364 SustainPine v3.0 1488
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 4.374e-14
N-terminus
sp_v3.0_unigene9655 SustainPine v3.0 1121
• AutoFact: Piwi domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Argonaute protein group 1.529e-36
Putative Complete
sp_v3.0_unigene11420 SustainPine v3.0 797
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 1.317e-33
C-terminus
sp_v3.0_unigene11498 SustainPine v3.0 1313
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 4.545e-30
Internal
sp_v3.0_unigene13534 SustainPine v3.0 471
• AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.9937e-43
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 1.429e-19
Internal
sp_v3.0_unigene49930 SustainPine v3.0 292
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 1.0e-27
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal
sp_v3.0_unigene53295 SustainPine v3.0 477
• AutoFact: RNA-dependent RNA polymerase n=5 Tax=Andropogoneae RepID=Q19VG2_MAIZE 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 1.599e-23
Internal
sp_v3.0_unigene58287 SustainPine v3.0 439
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 9.0e-38
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 8.911e-17
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
• AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 1.492e-20
Internal
sp_v3.0_unigene71493 SustainPine v3.0 319
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 1.0e-10
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 1.208e-10
Internal
sp_v3.0_unigene93988 SustainPine v3.0 403
• AutoFact: RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida RepID=Q9ZRX3_PETHY 3.0e-39
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 2.608e-23
Internal
sp_v3.0_unigene95704 SustainPine v3.0 514
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 1.042e-13
Internal
sp_v3.0_unigene96713 SustainPine v3.0 503
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 2.675e-14
Internal
sp_v3.0_unigene97778 SustainPine v3.0 637
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Eukaryotic translation initiation factor 2c, putative 7.789e-08
Internal
sp_v3.0_unigene100439 SustainPine v3.0 362
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 2.418e-14
Internal
sp_v3.0_unigene106801 SustainPine v3.0 328
• AutoFact: RNA-directed RNA polymerase [Petunia x hybrida] 5.0e-32
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 1.769e-23
Internal
sp_v3.0_unigene111538 SustainPine v3.0 266
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-25
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain