Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed RNA polymerase activity

Term: GO:0003968  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene138 SustainPine v3.0 3993
• AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene6086 SustainPine v3.0 913
• AutoFact: RNA-directed RNA polymerase-like, putative n=3 Tax=Solanum demissum RepID=Q6L447_SOLDE 3.0e-26
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-directed RNA polymerase 9.005e-08
C-terminus
sp_v3.0_unigene6169 SustainPine v3.0 2912
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 1.459e-23
C-terminus
sp_v3.0_unigene7704 SustainPine v3.0 2056
• AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 3.154e-20
C-terminus
sp_v3.0_unigene9983 SustainPine v3.0 646
• AutoFact: RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] sp|O82189.2|RDR4_ARATH RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase 4 gb|AEC06943.1| RNA-dependent RNA polymerase family 2.0e-33
• FL-Next: sp=Probable RNA-dependent RNA polymerase 3; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene13534 SustainPine v3.0 471
• AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.9937e-43
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 1.429e-19
Internal
sp_v3.0_unigene14086 SustainPine v3.0 654
• AutoFact: RNA-dependent RNA polymerase 6 n=1 Tax=Cucumis sativus RepID=E9NWL0_CUCSA 1.0e-34
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 9.007e-09
Internal
sp_v3.0_unigene35656 SustainPine v3.0 1151
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 6.658e-24
C-terminus
sp_v3.0_unigene46322 SustainPine v3.0 299
• AutoFact: RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida RepID=Q9ZRX3_PETHY 2.0e-22
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-directed RNA polymerase, putative 8.691e-17
Internal
sp_v3.0_unigene49930 SustainPine v3.0 292
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 1.0e-27
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal
sp_v3.0_unigene53295 SustainPine v3.0 477
• AutoFact: RNA-dependent RNA polymerase n=5 Tax=Andropogoneae RepID=Q19VG2_MAIZE 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 1.599e-23
Internal
sp_v3.0_unigene55991 SustainPine v3.0 230
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-09
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-directed RNA polymerase, putative 1.017e-17
Internal
sp_v3.0_unigene57703 SustainPine v3.0 384
• AutoFact: RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata RepID=Q75ZN6_VIGUN 5.0e-16
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene58287 SustainPine v3.0 439
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 9.0e-38
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 8.911e-17
Internal
sp_v3.0_unigene59903 SustainPine v3.0 305
• AutoFact: RVT_2 domain containing protein 8.0e-29
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative uncharacterized protein 9.904e-14
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
• AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 1.492e-20
Internal
sp_v3.0_unigene61302 SustainPine v3.0 281
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 2.0e-31
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 2.621e-08
Internal
sp_v3.0_unigene73467 SustainPine v3.0 329
• AutoFact: Probable RNA-dependent RNA polymerase 4 n=2 Tax=Oryza sativa Japonica Group RepID=RDR4_ORYSJ 4.0e-31
• FL-Next: sp=Probable RNA-dependent RNA polymerase 4; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene73701 SustainPine v3.0 323
• AutoFact: RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 dbj|BAC00725.1| putative RNA-dependent RNA polymerase [Oryza sativa Japonica Group] dbj|BAF80151.1| SHOOTLESS2 [Oryza sativa Japonica Group] 7.0e-31
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 3.812e-12
Internal
sp_v3.0_unigene76244 SustainPine v3.0 353
• AutoFact: Putative RNA-dependent RNA polymerase RdRP2 n=1 Tax=Nicotiana benthamiana RepID=Q647I4_NICBE 7.0e-23
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain