Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed RNA polymerase

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene138 SustainPine v3.0 3993
AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene6086 SustainPine v3.0 913
AutoFact: RNA-directed RNA polymerase-like, putative n=3 Tax=Solanum demissum RepID=Q6L447_SOLDE 3.0e-26
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: RNA-directed RNA polymerase 9.005e-08
C-terminus
sp_v3.0_unigene6169 SustainPine v3.0 2912
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 1.459e-23
C-terminus
sp_v3.0_unigene7704 SustainPine v3.0 2056
AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 3.154e-20
C-terminus
sp_v3.0_unigene58287 SustainPine v3.0 439
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 9.0e-38
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 8.911e-17
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 1.492e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain