Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51860 SustainPine v3.0 233
• AutoFact: Zinc finger, ZZ-type; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=A2Q2P2_MEDTR 4.0e-37
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene52359 SustainPine v3.0 462
• AutoFact: Lipoxygenase n=1 Tax=Olea europaea RepID=B6D1W5_OLEEU 7.00005e-41
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene52372 SustainPine v3.0 406
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SKT6_RICCO 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative second messenger-dependent protein kinase 2.918e-08
C-terminus
sp_v3.0_unigene52605 SustainPine v3.0 236
• AutoFact: PREDICTED: similar to PLDP1 (PHOSPHOLIPASE D ZETA1); phospholipase D n=1 Tax=Vitis vinifera RepID=UPI0001983212 2.0e-17
• FL-Next: sp=Phospholipase D p1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52736 SustainPine v3.0 176
• AutoFact: Auxin efflux facilitator SlPIN2 n=1 Tax=Solanum lycopersicum RepID=E5KGD3_SOLLC 4.0e-16
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 2.23e-29
Internal
sp_v3.0_unigene52848 SustainPine v3.0 398
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 3.0e-30
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 4.712e-08
C-terminus
sp_v3.0_unigene52961 SustainPine v3.0 244
• AutoFact: Amine oxidase, putative n=1 Tax=Ricinus communis RepID=B9SUC7_RICCO 2.0e-18
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein LSD1-LIKE 2 1.284e-08
Internal
sp_v3.0_unigene53133 SustainPine v3.0 290
• AutoFact: Endoplasmic reticulum [ER]-type calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9GNN6_POPTR 2.0e-33
• FL-Next: sp=Calcium-transporting ATPase 3, endoplasmic reticulum-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 2.359e-07
Internal
sp_v3.0_unigene53855 SustainPine v3.0 358
• AutoFact: armadillo repeat-containing kinesin-like protein 3 [Arabidopsis thaliana] sp|Q9FZ06.1|ARK3_ARATH RecName: Full=Armadillo repeat-containing kinesin-like protein 3; AltName: Full=Phosphatidic acid kinase gb|AAG08965.1|AF159052_1 kinesin-like protein [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin heavy chain, putative 1.469e-16
Internal
sp_v3.0_unigene54381 SustainPine v3.0 469
• AutoFact: RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein emb|CAA69934.1| G protein beta subunit-like [Medicago sativa subsp. x varia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.744e-18
N-terminus
sp_v3.0_unigene54882 SustainPine v3.0 339
• AutoFact: casein kinase 1 [Arabidopsis thaliana] sp|P42158.2|KC1D_ARATH RecName: Full=Casein kinase I isoform delta-like; Short=CKI-delta emb|CAB39675.1| Col-0 casein kinase I-like protein [Arabidopsis thaliana] emb|CAB79465.1| Col-0 casein kinase I-like protein [A 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase, putative 6.454e-22
Internal
sp_v3.0_unigene55780 SustainPine v3.0 400
• AutoFact: protein kinase ADK1-like protein [Arabidopsis thaliana] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase, putative 1.401e-21
Internal
sp_v3.0_unigene56280 SustainPine v3.0 404
• AutoFact: AGAMOUS homolog (Fragment) n=2 Tax=Liquidambar RepID=Q9XHM3_LIQST 9.0e-16
• FL-Next: tr=AGAMOUS; Taxus baccata (English yew). 0.0
• Sma3: AGAMOUS-like protein 2.327e-28
N-terminus
sp_v3.0_unigene56398 SustainPine v3.0 407
• AutoFact: P-type ATPase [Hordeum vulgare] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: P-type ATPase 1.583e-17
N-terminus
sp_v3.0_unigene57788 SustainPine v3.0 273
• AutoFact: phospholipid-translocating ATPase [Arabidopsis thaliana] sp|Q9SX33.1|ALA9_ARATH RecName: Full=Putative phospholipid-transporting ATPase 9; Short=AtALA9; AltName: Full=Aminophospholipid flippase 9 gb|AAD49973.1|AC008075_6 Similar to gb|AF067820 ATPase II f 7.0e-26
• FL-Next: sp=Putative phospholipid-transporting ATPase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Phospholipid-transporting ATPase, putative 1.68e-21
Internal
sp_v3.0_unigene58580 SustainPine v3.0 279
• AutoFact: ADP,ATP carrier protein, putative n=1 Tax=Ricinus communis RepID=B9RVW7_RICCO 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP,ATP carrier protein, putative 1.371e-19
Internal
sp_v3.0_unigene58841 SustainPine v3.0 228
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 4.713e-26
Internal
sp_v3.0_unigene59334 SustainPine v3.0 353
• AutoFact: putative endoplasmic reticulum-type calcium-transporting ATPase 3 [Arabidopsis thaliana] 3.0e-31
• FL-Next: sp=Calcium-transporting ATPase 3, endoplasmic reticulum-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 2.98e-07
Internal
sp_v3.0_unigene59685 SustainPine v3.0 216
• AutoFact: Auxin efflux carrier component n=4 Tax=Populus RepID=B9IHP8_POPTR 2.0e-31
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 0.0
Putative N-terminus
sp_v3.0_unigene60020 SustainPine v3.0 344
• AutoFact: auxin efflux carrier protein [Medicago truncatula] 7.0e-24
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 1.297e-40
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain