Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4213 SustainPine v3.0 1370
AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 2.25609e-43
C-terminus
sp_v3.0_unigene4321 SustainPine v3.0 741
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cysteine-type endopeptidase, putative 1.473e-11
Internal
sp_v3.0_unigene4982 SustainPine v3.0 307
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S7A8_RICCO 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.486e-20
Internal
sp_v3.0_unigene5163 SustainPine v3.0 432
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 8.0e-17
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 4.063e-13
Putative N-terminus
sp_v3.0_unigene5461 SustainPine v3.0 2085
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 8.929e-18
C-terminus
sp_v3.0_unigene5483 SustainPine v3.0 1558
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene5710 SustainPine v3.0 2439
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene5779 SustainPine v3.0 2673
AutoFact: diacylglycerol kinase1 [Arabidopsis thaliana] sp|Q39017.2|DGK1_ARATH RecName: Full=Diacylglycerol kinase 1; Short=DAG kinase 1; AltName: Full=Diglyceride kinase 1; Short=DGK 1 emb|CAB62604.1| diacylglycerol kinase (ATDGK1) [Arabidopsis thaliana] dbj|BAB09 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Diacylglycerol kinase 2.095e-10
C-terminus
sp_v3.0_unigene6191 SustainPine v3.0 3544
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.58596e-41
Complete
sp_v3.0_unigene6355 SustainPine v3.0 2803
AutoFact: Lipoxygenase (Fragment) n=5 Tax=Vitis vinifera RepID=D7U236_VITVI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Putative Complete
sp_v3.0_unigene6439 SustainPine v3.0 1817
AutoFact: Pyrroline-5-carboxylate synthetase n=1 Tax=Gossypium arboreum RepID=B1A2U9_GOSAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrroline-5-carboxylate synthetase 3.169e-37
N-terminus
sp_v3.0_unigene6608 SustainPine v3.0 2999
AutoFact: Lipoxygenase n=1 Tax=Ricinus communis RepID=B9RSQ2_RICCO 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene6818 SustainPine v3.0 1252
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Ginkgo biloba RepID=Q2Z2G4_GINBI 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 4.591e-27
N-terminus
sp_v3.0_unigene6901 SustainPine v3.0 3756
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 8.507e-28
Complete
sp_v3.0_unigene7052 SustainPine v3.0 2333
AutoFact: ATP-synt_B multi-domain protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.6e-34
Putative Complete
sp_v3.0_unigene7561 SustainPine v3.0 1924
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=C0PT31_PICSI 0.0
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene7728 SustainPine v3.0 1551
AutoFact: phospholipid-translocating ATPase [Arabidopsis thaliana] sp|Q9LNQ4.2|ALA4_ARATH RecName: Full=Putative phospholipid-transporting ATPase 4; Short=AtALA4; AltName: Full=Aminophospholipid flippase 4 gb|AEE29599.1| phospholipid-translocating ATPase [Arabidops 0.0
FL-Next: sp=Putative phospholipid-transporting ATPase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 4.81e-21
C-terminus
sp_v3.0_unigene7784 SustainPine v3.0 1703
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene7843 SustainPine v3.0 3324
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.39801e-41
Putative C-terminus
sp_v3.0_unigene8066 SustainPine v3.0 2677
AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 2.563e-39
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain