Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161736 SustainPine v3.0 389
AutoFact: receptor for activated C kinase 1C [Arabidopsis thaliana] sp|Q9LV28.1|GPLPC_ARATH RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein C; AltName: Full=Receptor for activated C kinase 1C dbj|BAB02025.1| guanine nucleotide-binding pro 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.601e-18
Internal
sp_v3.0_unigene162007 SustainPine v3.0 373
AutoFact: Lipoxygenase n=1 Tax=Adelostemma gracillimum RepID=Q4FCM5_9GENT 9.0e-32
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene162606 SustainPine v3.0 314
AutoFact: Phospholipid-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9SRT5_RICCO 1.99965e-42
FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 1.88601e-41
Internal
sp_v3.0_unigene162648 SustainPine v3.0 177
AutoFact: RecName: Full=Lysine-specific histone demethylase 1 homolog 3; AltName: Full=Flavin-containing amine oxidase domain-containing protein 3; AltName: Full=Protein FLOWERING LOCUS D-LIKE; AltName: Full=Protein LSD1-LIKE 3 emb|CAH68056.1| B0103C08-B0602B01.13 3.0e-12
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 5.237e-09
Internal
sp_v3.0_unigene163242 SustainPine v3.0 353
AutoFact: Lipoxygenase n=2 Tax=Prunus dulcis RepID=Q8W4X6_PRUDU 2.0e-30
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene163272 SustainPine v3.0 358
AutoFact: E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana] sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin transport protein BIG; AltName: Full=Protein ATTENUATED SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1; AltName: Full=Protein DARK OVER-EXPRESSION OF CA 0.0
FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163291 SustainPine v3.0 311
AutoFact: putative Ca2+-transporting ATPase, 3'-partial [Oryza sativa Japonica Group] 3.0e-15
FL-Next: sp=Calcium-transporting ATPase 3, endoplasmic reticulum-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene163515 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164199 SustainPine v3.0 455
AutoFact: ADP/ATP translocator [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenine nucleotide translocator 9.09e-24
Internal
sp_v3.0_unigene164481 SustainPine v3.0 203
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 1.0e-15
FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164742 SustainPine v3.0 126
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 3.941e-19
Internal
sp_v3.0_unigene164865 SustainPine v3.0 261
AutoFact: P-type ATPase [Hordeum vulgare] 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 3.01e-16
Internal
sp_v3.0_unigene165847 SustainPine v3.0 307
AutoFact: Lipoxygenase n=1 Tax=Solanum lycopersicum RepID=Q9FT17_SOLLC 3.0e-14
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 1.547e-38
Internal
sp_v3.0_unigene166163 SustainPine v3.0 327
AutoFact: phospholipid-translocating ATPase [Arabidopsis thaliana] sp|Q9LNQ4.2|ALA4_ARATH RecName: Full=Putative phospholipid-transporting ATPase 4; Short=AtALA4; AltName: Full=Aminophospholipid flippase 4 gb|AEE29599.1| phospholipid-translocating ATPase [Arabidops 7.0e-32
FL-Next: sp=Putative phospholipid-transporting ATPase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 6.236e-25
Internal
sp_v3.0_unigene166933 SustainPine v3.0 251
AutoFact: HASTY [Arabidopsis thaliana] 3.0e-16
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At3g05040 6.546e-10
Internal
sp_v3.0_unigene167702 SustainPine v3.0 189
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAD21431.1| putative protein kinase [Arabidopsis thaliana] gb|AEC09236.1| protein kinase-like protein [Arabidopsis thaliana] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168095 SustainPine v3.0 256
AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 2.0e-15
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
Sma3: Putative ubiquitin-specific protease 3.176e-12
Internal
sp_v3.0_unigene168310 SustainPine v3.0 229
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.0e-29
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWIRM domain protein 2.407e-12
Internal
sp_v3.0_unigene184235 SustainPine v3.0 713
AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
C-terminus
sp_v3.0_unigene186511 SustainPine v3.0 311
AutoFact: ADP,ATP carrier protein, mitochondrial n=9 Tax=Poaceae RepID=ADT_ORYSJ 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenine nucleotide translocator 8.847e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain