Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: D-xylose metabolic process

Term: GO:0042732  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene98 SustainPine v3.0 1890
AutoFact: Xylose isomerase n=7 Tax=Poaceae RepID=Q8H3Q7_ORYSJ 0.0
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 1.507e-35
Complete
sp_v3.0_unigene54903 SustainPine v3.0 185
AutoFact: Dtdp-glucose 4-6-dehydratase, putative n=1 Tax=Ricinus communis RepID=B9T734_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucuronic acid decarboxylase 1.341e-21
Internal
sp_v3.0_unigene75792 SustainPine v3.0 221
AutoFact: UDP-glucuronic acid decarboxylase 3 [Populus tomentosa] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucuronic acid decarboxylase 7.088e-17
C-terminus
sp_v3.0_unigene102199 SustainPine v3.0 768
AutoFact: Xylose isomerase n=2 Tax=Hordeum vulgare RepID=XYLA_HORVU 0.0
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 5.395e-32
N-terminus
sp_v3.0_unigene128169 SustainPine v3.0 493
AutoFact: Xylose isomerase n=2 Tax=Hordeum vulgare RepID=XYLA_HORVU 0.0
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 1.032e-35
N-terminus
sp_v3.0_unigene143956 SustainPine v3.0 487
AutoFact: UDP-xylose synthase 4 [Arabidopsis thaliana] gb|AAM14846.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] gb|AAY25428.1| At2g47650 [Arabidopsis thaliana] dbj|BAH19459.1| AT2G47650 [Arabidopsis thaliana] gb|AEC10871.1| UDP-xylose synthase 4 5.0e-35
FL-Next: sp=GDP-mannose 3,5-epimerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: UDP-glucuronic acid decarboxylase 3.31e-24
Putative C-terminus
sp_v3.0_unigene156989 SustainPine v3.0 239
AutoFact: dTDP-glucose 4-6-dehydratase n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74036_SYNY3 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucuronic acid decarboxylase 2.271e-24
Internal
sp_v3.0_unigene165362 SustainPine v3.0 276
AutoFact: Xylose isomerase n=1 Tax=Picea sitchensis RepID=B8LKP5_PICSI 2.94273e-44
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 5.395e-32
N-terminus
sp_v3.0_unigene165429 SustainPine v3.0 309
AutoFact: Xylose isomerase (Fragment) n=3 Tax=Vitis vinifera RepID=D7SQ37_VITVI 4.0e-21
FL-Next: sp=Xylose isomerase; Hordeum vulgare (Barley). 0.0
Sma3: Xylose isomerase 9.733e-25
Putative N-terminus
sp_v3.0_unigene190098 SustainPine v3.0 444
AutoFact: Xylose isomerase n=1 Tax=Phytophthora infestans T30-4 RepID=D0NA42_PHYIT 3.0e-32
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 4.354e-32
C-terminus
sp_v3.0_unigene195339 SustainPine v3.0 368
AutoFact: Xylose isomerase n=2 Tax=Selaginella moellendorffii RepID=D8T6H4_SELML 6.0e-15
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 2.448e-28
Internal
sp_v3.0_unigene199701 SustainPine v3.0 475
AutoFact: xylose isomerase [Bacteroides thetaiotaomicron VPI-5482] sp|Q8A9M2.1|XYLA_BACTN RecName: Full=Xylose isomerase gb|AAO75900.1| xylose isomerase [Bacteroides thetaiotaomicron VPI-5482] 8.0e-29
FL-Next: sp=Xylose isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylose isomerase 4.354e-32
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain