Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26378 SustainPine v3.0 501
• AutoFact: Elongation factor 2 n=5 Tax=Caenorhabditis RepID=EF2_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 6.10966e-43
C-terminus
sp_v3.0_unigene26414 SustainPine v3.0 483
• AutoFact: 40S ribosomal protein S16 n=1 Tax=Acromyrmex echinatior RepID=F4X8C8_9HYME 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.955e-36
Complete
sp_v3.0_unigene26477 SustainPine v3.0 382
• AutoFact: 40S ribosomal protein S2 [Aedes aegypti] ref|XP_001654299.1| 40S ribosomal protein S2 [Aedes aegypti] gb|ABF18026.1| ribosomal protein S2 [Aedes aegypti] gb|EAT37898.1| 40S ribosomal protein S2 [Aedes aegypti] gb|EAT37899.1| 40S ribosomal protein S2 [Aede 4.00001e-40
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.066e-19
Internal
sp_v3.0_unigene26482 SustainPine v3.0 888
• AutoFact: PREDICTED: similar to S3Ae ribosomal protein [Tribolium castaneum] gb|EFA05373.1| hypothetical protein TcasGA2_TC015539 [Tribolium castaneum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 4.601e-17
Complete
sp_v3.0_unigene26489 SustainPine v3.0 421
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBR7_THAPS 6.0e-38
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene26548 SustainPine v3.0 359
• AutoFact: 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] gb|EAW25351.1| 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene26575 SustainPine v3.0 571
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene26581 SustainPine v3.0 555
• AutoFact: Elongation factor, putative n=2 Tax=Arachnida RepID=B7QMV1_IXOSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 5.94151e-43
Internal
sp_v3.0_unigene26750 SustainPine v3.0 396
• AutoFact: Ribosomal protein L12e n=1 Tax=Scarabaeus laticollis RepID=Q4GXJ3_SCALT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.004e-15
C-terminus
sp_v3.0_unigene26855 SustainPine v3.0 1625
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.156e-28
C-terminus
sp_v3.0_unigene27180 SustainPine v3.0 710
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 4.228e-21
Complete
sp_v3.0_unigene27188 SustainPine v3.0 823
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 4.891e-17
Putative Complete
sp_v3.0_unigene27189 SustainPine v3.0 584
• AutoFact: Rac [Aplysia californica] gb|AAP22281.1| Rac [Aplysia californica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rac protein 2.41e-17
Putative Complete
sp_v3.0_unigene27190 SustainPine v3.0 805
• AutoFact: S4 n=1 Tax=Suberites domuncula RepID=Q4KTD8_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 5.496e-24
Complete
sp_v3.0_unigene27230 SustainPine v3.0 680
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.002e-22
Complete
sp_v3.0_unigene27283 SustainPine v3.0 634
• AutoFact: Putative 60S ribosomal protein L9 n=1 Tax=Spadella cephaloptera RepID=A8E672_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.557e-22
Complete
sp_v3.0_unigene27296 SustainPine v3.0 610
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene27309 SustainPine v3.0 299
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene27319 SustainPine v3.0 635
• AutoFact: RL5, ribosomal protein 5, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YLN7_THAPS 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
C-terminus
sp_v3.0_unigene27327 SustainPine v3.0 478
• AutoFact: PREDICTED: ribosomal protein L32-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB2E0 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain