Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25689 SustainPine v3.0 488
• AutoFact: Catalytic activity: Acyl-CoA + acetyl-CoA <=> CoA + 3-oxoacyl-CoA n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QCE8_ASPNC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-ketoacyl-CoA thiolase 1.201e-11
C-terminus
sp_v3.0_unigene25691 SustainPine v3.0 259
• AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.539e-10
C-terminus
sp_v3.0_unigene25730 SustainPine v3.0 503
• AutoFact: Os01g0174700 protein n=3 Tax=Oryza sativa RepID=Q94E49_ORYSJ 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 9.324e-33
Putative C-terminus
sp_v3.0_unigene25746 SustainPine v3.0 488
• AutoFact: 40S ribosomal protein S3 n=1 Tax=Xenopsylla cheopis RepID=A2IA98_9NEOP 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 7.2e-11
C-terminus
sp_v3.0_unigene25752 SustainPine v3.0 485
• AutoFact: small nuclear ribonucleoprotein Sm D3 [Homo sapiens] ref|NP_080371.1| small nuclear ribonucleoprotein Sm D3 [Mus musculus] ref|NP_001007839.1| small nuclear ribonucleoprotein Sm D3 [Gallus gallus] ref|NP_001017093.1| small nuclear ribonucleoprotein D3 pol 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nuclear ribonucleoprotein, putative 6.504e-13
Putative Complete
sp_v3.0_unigene25790 SustainPine v3.0 562
• AutoFact: 60S ribosomal protein L32 n=2 Tax=Sclerotiniaceae RepID=A6S9U4_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene25802 SustainPine v3.0 527
• AutoFact: PREDICTED: 60S ribosomal protein L13 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000516EED 4.0e-34
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene25814 SustainPine v3.0 593
• AutoFact: Ribosomal protein L6e (Fragment) n=1 Tax=Carabus granulatus RepID=Q4GXM9_CARGR 4.00001e-41
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 5.87144e-42
Putative C-terminus
sp_v3.0_unigene25824 SustainPine v3.0 596
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
C-terminus
sp_v3.0_unigene25827 SustainPine v3.0 475
• AutoFact: 13 kDa ribonucleoprotein-associated protein n=2 Tax=Oomycetes RepID=D0NZI7_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.86e-08
Complete
sp_v3.0_unigene25838 SustainPine v3.0 582
• AutoFact: PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like isoform 1 [Apis mellifera] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Complete
sp_v3.0_unigene25870 SustainPine v3.0 432
• AutoFact: translation elongation factor 1-alpha [Capsaspora owczarzaki] gb|EFW42675.1| translation elongation factor 1-alpha [Capsaspora owczarzaki ATCC 30864] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene25881 SustainPine v3.0 421
• AutoFact: 40S ribosomal protein S18 n=5 Tax=Deuterostomia RepID=RS18_BRABE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
C-terminus
sp_v3.0_unigene25910 SustainPine v3.0 490
• AutoFact: 40S ribosomal protein S6 n=62 Tax=Euteleostomi RepID=RS6_HUMAN 9.94922e-44
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
Internal
sp_v3.0_unigene25911 SustainPine v3.0 537
• AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene25913 SustainPine v3.0 489
• AutoFact: 60S ribosomal protein L34 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U5J1_9EUKA 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L34 1.124e-13
Complete
sp_v3.0_unigene25929 SustainPine v3.0 550
• AutoFact: YALI0B15103p n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6CEJ8_YARLI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.907e-11
Complete
sp_v3.0_unigene25930 SustainPine v3.0 595
• AutoFact: rac gtpase [Aedes aegypti] gb|EAT38364.1| rac gtpase [Aedes aegypti] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rac protein 1.402e-17
C-terminus
sp_v3.0_unigene25954 SustainPine v3.0 498
• AutoFact: ribosomal protein S4 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.25e-24
C-terminus
sp_v3.0_unigene25955 SustainPine v3.0 507
• AutoFact: FK506-binding protein-like protein n=1 Tax=Echinococcus granulosus RepID=C6ZI52_ECHGR 2.0e-40
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Coccomyxa subellipsoidea C-169. 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 7.775e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain