Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene208533 SustainPine v3.0 441
• AutoFact: Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Cucumis sativus RepID=PCKA_CUCSA 0.0
• FL-Next: sp=Phosphoenolpyruvate carboxykinase [ATP]; Cucumis sativus (Cucumber). 0.0
• Sma3: Phosphoenolpyruvate carboxykinase 1.108e-17
Internal
sp_v3.0_unigene208539 SustainPine v3.0 876
• AutoFact: putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arginine/serine-rich splicing factor, putative 1.249e-13
Putative C-terminus
sp_v3.0_unigene208546 SustainPine v3.0 781
• AutoFact: heat shock protein 81-1 [Arabidopsis thaliana] dbj|BAA98082.1| heat-shock protein [Arabidopsis thaliana] gb|AAM91104.1| AT5g52640/F6N7_13 [Arabidopsis thaliana] gb|AAN46890.1| At5g52640/F6N7_13 [Arabidopsis thaliana] gb|AED96244.1| heat shock protein 81-1 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene208783 SustainPine v3.0 246
• AutoFact: RuBisCO large subunit-binding protein subunit beta, chloroplastic n=6 Tax=core eudicotyledons RepID=RUBB_PEA 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 3.515e-11
Internal
sp_v3.0_unigene208803 SustainPine v3.0 190
• AutoFact: Probable nucleolar protein 5-2 n=2 Tax=Arabidopsis RepID=NOP5B_ARATH 3.0e-18
• FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Nucleolar RNA binding protein 6.195e-09
Internal
sp_v3.0_unigene208898 SustainPine v3.0 188
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.086e-11
N-terminus
sp_v3.0_unigene208955 SustainPine v3.0 594
• AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 4.0e-22
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H4 1.127e-11
Complete
sp_v3.0_unigene208979 SustainPine v3.0 333
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 8.0e-30
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Cytochrome c 4.835e-39
Putative C-terminus
sp_v3.0_unigene209003 SustainPine v3.0 309
• AutoFact: Histone domain containing protein 6.0e-16
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene209051 SustainPine v3.0 507
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 4.00001e-40
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 2.8e-18
C-terminus
sp_v3.0_unigene209075 SustainPine v3.0 322
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 1.0e-15
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene209077 SustainPine v3.0 444
• AutoFact: [J] COG2163 Ribosomal protein L14E/L6E/L27E 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 3.872e-16
N-terminus
sp_v3.0_unigene209121 SustainPine v3.0 560
• AutoFact: RuBisCO subunit binding-protein beta subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56ZP2_ARATH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 1.148e-10
C-terminus
sp_v3.0_unigene209151 SustainPine v3.0 283
• AutoFact: Protein transport SEC13-like protein n=1 Tax=Solanum tuberosum RepID=Q2PYY1_SOLTU 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene209200 SustainPine v3.0 649
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 0.0
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H2B 6.485e-33
C-terminus
sp_v3.0_unigene209202 SustainPine v3.0 589
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Polyubiquitin 1.003e-07
Putative Complete
sp_v3.0_unigene209209 SustainPine v3.0 520
• AutoFact: Ribosomal protein L30 n=3 Tax=Medicago truncatula RepID=Q2HVI3_MEDTR 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.272e-07
N-terminus
sp_v3.0_unigene209241 SustainPine v3.0 170
• AutoFact: Ribosomal protein S7 n=1 Tax=Elaeis guineensis RepID=B3TM44_ELAGV 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.643e-26
Internal
sp_v3.0_unigene209296 SustainPine v3.0 280
• AutoFact: Ribosomal protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CFH4_9EUKA 2.0e-22
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.451e-32
C-terminus
sp_v3.0_unigene209305 SustainPine v3.0 386
• AutoFact: Ribosomal protein L27a [Bos taurus] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27a-2 4.997e-12
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain