Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene204629 SustainPine v3.0 418
• AutoFact: ribosomal protein S17 [Branchiostoma belcheri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S17-4 4.166e-12
N-terminus
sp_v3.0_unigene204642 SustainPine v3.0 439
• AutoFact: 60S ribosomal protein L8 n=3 Tax=Caenorhabditis RepID=RL8_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene204649 SustainPine v3.0 502
• AutoFact: 26S protease regulatory subunit 6A n=4 Tax=leotiomyceta RepID=A6SQ02_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 8.006e-14
Putative C-terminus
sp_v3.0_unigene204665 SustainPine v3.0 443
• AutoFact: Elongation factor 2 (Fragment) n=1 Tax=Perca flavescens RepID=F1C789_PERFV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 6.474e-43
C-terminus
sp_v3.0_unigene204673 SustainPine v3.0 156
• AutoFact: Ribosomal protein L12 n=1 Tax=Argopecten irradians RepID=Q8ITA1_AEQIR 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 4.833e-15
Internal
sp_v3.0_unigene204682 SustainPine v3.0 280
• AutoFact: putative ribosomal protein S18 [Oryza sativa Japonica Group] dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.39e-12
N-terminus
sp_v3.0_unigene204685 SustainPine v3.0 456
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene204696 SustainPine v3.0 485
• AutoFact: Putative translation elongation factor 2 n=2 Tax=Aphidinae RepID=Q5XUB4_TOXCI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 1.14486e-42
C-terminus
sp_v3.0_unigene204699 SustainPine v3.0 371
• AutoFact: PREDICTED: ribosomal protein L12-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC093 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
N-terminus
sp_v3.0_unigene204713 SustainPine v3.0 622
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.92e-22
Putative Complete
sp_v3.0_unigene204716 SustainPine v3.0 471
• AutoFact: S13 n=1 Tax=Suberites domuncula RepID=Q4KTC9_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.195e-14
Putative Complete
sp_v3.0_unigene204727 SustainPine v3.0 602
• AutoFact: 60S ribosomal protein L11 n=2 Tax=Tetrahymena thermophila RepID=RL11_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Putative Complete
sp_v3.0_unigene204759 SustainPine v3.0 407
• AutoFact: histone H4 [Hyacinthus orientalis] 1.00053e-42
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H4 1.338e-11
Putative Complete
sp_v3.0_unigene204767 SustainPine v3.0 380
• AutoFact: Putative ribosomal protein S24 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1X5_9ARAC 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 7.503e-12
Putative Complete
sp_v3.0_unigene204768 SustainPine v3.0 512
• AutoFact: Ribosomal protein S7 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C500_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.392e-26
Putative N-terminus
sp_v3.0_unigene204769 SustainPine v3.0 345
• AutoFact: Cytosolic large ribosomal subunit L11 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=A3E3U1_PFIPI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene204772 SustainPine v3.0 416
• AutoFact: Ribosomal protein S17 n=1 Tax=Branchiostoma belcheri RepID=Q8ISP1_BRABE 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S17-4 3.816e-12
C-terminus
sp_v3.0_unigene204787 SustainPine v3.0 427
• AutoFact: Histone H2B.1 n=3 Tax=Tetrahymena RepID=H2B1_TETTH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.362e-34
Complete
sp_v3.0_unigene204788 SustainPine v3.0 517
• AutoFact: Ribosomal protein L32 n=2 Tax=Chlamydomonadales RepID=A8J2G4_CHLRE 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene204873 SustainPine v3.0 466
• AutoFact: Ribosomal protein, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R2E5_CRYGW 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain