Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene204447 SustainPine v3.0 463
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Polysphondylium pallidum RepID=D3BM86_POLPA 1.0e-30
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene204453 SustainPine v3.0 579
• AutoFact: Elongation factor 1-alpha n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A1M9_TRYB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene204455 SustainPine v3.0 230
• AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBAA25 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rac protein 2.485e-17
Putative N-terminus
sp_v3.0_unigene204467 SustainPine v3.0 503
• AutoFact: PREDICTED: similar to yeast ribosomal protein S28 homologue n=1 Tax=Monodelphis domestica RepID=UPI0000F2C5F5 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene204472 SustainPine v3.0 572
• AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 27 1.176e-08
Putative N-terminus
sp_v3.0_unigene204489 SustainPine v3.0 313
• AutoFact: 40S ribosomal protein S13 n=1 Tax=Trichinella spiralis RepID=E5S1B4_TRISP 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.281e-14
C-terminus
sp_v3.0_unigene204503 SustainPine v3.0 468
• AutoFact: Ribosomal protein S16 n=2 Tax=Chlamydomonadales RepID=A8HSU7_CHLRE 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.21e-10
C-terminus
sp_v3.0_unigene204516 SustainPine v3.0 474
• AutoFact: 60S ribosomal protein L14 n=8 Tax=Glires RepID=RL14_MOUSE 4.0e-23
• FL-Next: sp=60S ribosomal protein L14-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 60S ribosomal protein L14, putative 2.304e-09
Complete
sp_v3.0_unigene204524 SustainPine v3.0 513
• AutoFact: Histone H2B n=1 Tax=Culex quinquefasciatus RepID=B0X774_CULQU 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.165e-34
Putative Complete
sp_v3.0_unigene204547 SustainPine v3.0 491
• AutoFact: ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEA97088.1| ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEE25534.1| ribosomal protein L11, putative [Toxoplasma gondii GT1] gb|EEE32699.1| ribosomal protein L11, putative [Toxopla 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene204551 SustainPine v3.0 514
• AutoFact: RL5, ribosomal protein 5, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YLN7_THAPS 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.039e-14
C-terminus
sp_v3.0_unigene204563 SustainPine v3.0 440
• AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.922e-10
Putative Complete
sp_v3.0_unigene204577 SustainPine v3.0 434
• AutoFact: 60S ribosomal protein L23 n=3 Tax=Oomycetes RepID=D0MUG8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.151e-10
Complete
sp_v3.0_unigene204586 SustainPine v3.0 553
• AutoFact: Ribosomal protein L21e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4GXF5_9COLE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.126e-10
Complete
sp_v3.0_unigene204592 SustainPine v3.0 387
• AutoFact: 60S ribosomal protein L11 n=4 Tax=Cryptosporidium RepID=Q5CX79_CRYPV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative N-terminus
sp_v3.0_unigene204594 SustainPine v3.0 397
• AutoFact: 40S ribosomal protein S23 n=32 Tax=leotiomyceta RepID=RS23_ASPFU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative C-terminus
sp_v3.0_unigene204598 SustainPine v3.0 327
• AutoFact: Heat shock-like 85 kDa protein n=9 Tax=Trypanosoma RepID=HSP85_TRYCR 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 90 3.491e-29
Internal
sp_v3.0_unigene204609 SustainPine v3.0 456
• AutoFact: 60S ribosomal protein L11 n=4 Tax=sordariomyceta RepID=A6S5F3_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
C-terminus
sp_v3.0_unigene204610 SustainPine v3.0 275
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 2.0e-17
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 6.448e-33
C-terminus
sp_v3.0_unigene204625 SustainPine v3.0 411
• AutoFact: glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] 3.0e-22
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain