Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene202887 SustainPine v3.0 444
• AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene202891 SustainPine v3.0 517
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.84e-10
N-terminus
sp_v3.0_unigene202926 SustainPine v3.0 479
• AutoFact: Ribosomal protein L12e n=1 Tax=Timarcha balearica RepID=Q4GXJ1_TIMBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
N-terminus
sp_v3.0_unigene202931 SustainPine v3.0 479
• AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 8.674e-16
Complete
sp_v3.0_unigene203045 SustainPine v3.0 531
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.642e-23
Complete
sp_v3.0_unigene203061 SustainPine v3.0 576
• AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene203069 SustainPine v3.0 662
• AutoFact: Ribosomal protein L19 n=8 Tax=Physcomitrella patens subsp. patens RepID=A9S5S6_PHYPA 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 7.107e-31
Complete
sp_v3.0_unigene203072 SustainPine v3.0 739
• AutoFact: Heat Shock Protein 90, cytosolic [Ostreococcus lucimarinus CCE9901] gb|ABO98231.1| Heat Shock Protein 90, cytosolic [Ostreococcus lucimarinus CCE9901] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 90 7.764e-30
Complete
sp_v3.0_unigene203081 SustainPine v3.0 396
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 3.0e-40
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
N-terminus
sp_v3.0_unigene203124 SustainPine v3.0 646
• AutoFact: 60S ribosomal protein L11, putative n=3 Tax=Chromadorea RepID=A8NKQ0_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Putative Complete
sp_v3.0_unigene203167 SustainPine v3.0 629
• AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 6.216e-12
Putative Complete
sp_v3.0_unigene203221 SustainPine v3.0 648
• AutoFact: Elongation factor 1-alpha n=7 Tax=Percomorpha RepID=Q8UW60_ORENI 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene203224 SustainPine v3.0 454
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 9.99995e-41
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene203248 SustainPine v3.0 544
• AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 9.278e-16
Complete
sp_v3.0_unigene203265 SustainPine v3.0 549
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene203290 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 3.831e-15
C-terminus
sp_v3.0_unigene203322 SustainPine v3.0 473
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene203367 SustainPine v3.0 546
• AutoFact: Ribosomal protein L19 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC86_PHYIT 1.0e-32
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
C-terminus
sp_v3.0_unigene203380 SustainPine v3.0 480
• AutoFact: Ribosomal protein S30 containing protein [Tetrahymena thermophila] pdb|2XZM|X Chain X, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 p 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene203389 SustainPine v3.0 537
• AutoFact: L27a n=1 Tax=Suberites domuncula RepID=Q4KTF7_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 9.278e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain