Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene200345 SustainPine v3.0 505
• AutoFact: Histone H2B n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UPD5_9EUKA 2.0e-33
• FL-Next: sp=Histone H2B; Olisthodiscus luteus (Marine phytoflagellate) (Heterosigma akashiwo). 0.0
• Sma3: Histone H2B 1.211e-38
Complete
sp_v3.0_unigene200368 SustainPine v3.0 438
• AutoFact: Spliceosome associated protein, putative n=1 Tax=Ricinus communis RepID=B9RRM5_RICCO 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative spliceosome associated protein 1.147e-08
Putative N-terminus
sp_v3.0_unigene200375 SustainPine v3.0 412
• AutoFact: PREDICTED: similar to ribosomal protein L7e n=1 Tax=Nasonia vitripennis RepID=UPI00015B5B45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-1 7.092e-08
C-terminus
sp_v3.0_unigene200430 SustainPine v3.0 559
• AutoFact: Ribosomal protein S9 n=2 Tax=Protostomia RepID=A9LMJ6_HALDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.68156e-44
N-terminus
sp_v3.0_unigene200479 SustainPine v3.0 390
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 7.492e-21
Internal
sp_v3.0_unigene200488 SustainPine v3.0 442
• AutoFact: 3-ketoacyl-CoA thiolase A n=1 Tax=Phytophthora infestans T30-4 RepID=D0N949_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-ketoacyl-CoA thiolase 1.262e-11
Putative C-terminus
sp_v3.0_unigene200489 SustainPine v3.0 379
• AutoFact: Ribosomal protein L7-like n=1 Tax=Ixodes scapularis RepID=Q4PM37_IXOSC 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.802e-08
Putative N-terminus
sp_v3.0_unigene200506 SustainPine v3.0 425
• AutoFact: Ribosomal protein rpl12 n=1 Tax=Eurythoe complanata RepID=A8UG21_EURCO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
N-terminus
sp_v3.0_unigene200513 SustainPine v3.0 371
• AutoFact: Ribosomal protein L7a (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E8_9MOLL 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
N-terminus
sp_v3.0_unigene200522 SustainPine v3.0 344
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Salmo salar RepID=B5XG61_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Putative N-terminus
sp_v3.0_unigene200535 SustainPine v3.0 296
• AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=S phase-specific protein BIS289 gb|AAA33013.1| S-phase-specific protein [Brassica rapa] emb|CAA81030.1| unnamed protein product [Brassica rapa] 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.874e-17
Putative N-terminus
sp_v3.0_unigene200571 SustainPine v3.0 353
• AutoFact: Guanylate-binding protein [Arabidopsis thaliana] gb|AED95334.1| Guanylate-binding protein [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene200577 SustainPine v3.0 288
• AutoFact: Heat-shock protein 90 (Fragment) n=1 Tax=Griffithsia japonica RepID=Q9ZT55_GRIJA 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 90 2.062e-32
Putative C-terminus
sp_v3.0_unigene200584 SustainPine v3.0 218
• AutoFact: 60S ribosomal protein L23 n=54 Tax=Deuterostomia RepID=RL23_HUMAN 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 6.572e-11
N-terminus
sp_v3.0_unigene200893 SustainPine v3.0 457
• AutoFact: AP2 domain transcription factor RAP2 n=1 Tax=Cucumis melo subsp. melo RepID=E5GB56_CUCME 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.005e-38
Internal
sp_v3.0_unigene200906 SustainPine v3.0 416
• AutoFact: Elongation factor G, domain IV family protein n=3 Tax=Tetrahymena RepID=Q22DR0_TETTH 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 6.44597e-43
Internal
sp_v3.0_unigene200968 SustainPine v3.0 291
• AutoFact: AAA-type ATPase family protein n=1 Tax=Arabidopsis thaliana RepID=B3H533_ARATH 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 5.335e-08
Internal
sp_v3.0_unigene201223 SustainPine v3.0 299
• AutoFact: DUF623 domain containing protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene201668 SustainPine v3.0 615
• AutoFact: 40S ribosomal protein S9-1 n=2 Tax=Arabidopsis RepID=RS91_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Putative Complete
sp_v3.0_unigene202053 SustainPine v3.0 1001
• AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain