Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene199659 SustainPine v3.0 471
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=F5GTH9_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.996e-18
N-terminus
sp_v3.0_unigene199678 SustainPine v3.0 412
• AutoFact: U3 snoRNP protein [Dictyostelium discoideum AX4] gb|EAL67771.1| U3 snoRNP protein [Dictyostelium discoideum AX4] 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; (Phytophthora megasperma f. sp. glycines). 0.0
Internal
sp_v3.0_unigene199686 SustainPine v3.0 363
• AutoFact: 40S ribosomal protein S4 [Dictyostelium discoideum AX4] sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4 gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum] gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene199711 SustainPine v3.0 320
• AutoFact: Putative 40S ribosomal protein RPS23 n=1 Tax=Phoronis muelleri RepID=B2YI18_9BILA 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.718e-10
N-terminus
sp_v3.0_unigene199732 SustainPine v3.0 467
• AutoFact: fibrillarin [Xenopus (Silurana) tropicalis] gb|AAH62511.1| fibrillarin [Xenopus (Silurana) tropicalis] emb|CAJ81878.1| fibrillarin [Xenopus (Silurana) tropicalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 1.273e-08
C-terminus
sp_v3.0_unigene199762 SustainPine v3.0 373
• AutoFact: 60S ribosomal protein L6 n=2 Tax=Neurospora crassa RepID=Q7SH22_NEUCR 3.00004e-41
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene199775 SustainPine v3.0 323
• AutoFact: putative eukaryotic translation initiation factor 6 [Trifolium pratense] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
Internal
sp_v3.0_unigene199793 SustainPine v3.0 362
• AutoFact: Ribosomal protein L13 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q245E7_TETTH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 8.045e-21
Putative N-terminus
sp_v3.0_unigene199822 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5L603_9ALVE 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 9.473e-11
N-terminus
sp_v3.0_unigene199853 SustainPine v3.0 445
• AutoFact: Transcription factor, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTK5_PHYIT 2.0e-30
• FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Transcription factor E2F 1.233e-29
N-terminus
sp_v3.0_unigene199855 SustainPine v3.0 361
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=rosids RepID=B9RK17_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
C-terminus
sp_v3.0_unigene199888 SustainPine v3.0 448
• AutoFact: elongation factor [Caenorhabditis elegans] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 5.94151e-43
Internal
sp_v3.0_unigene199920 SustainPine v3.0 307
• AutoFact: PREDICTED: 60S ribosomal protein L7a [Apis mellifera] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.408e-08
Putative C-terminus
sp_v3.0_unigene199967 SustainPine v3.0 527
• AutoFact: Putative 60S ribosomal protein RPL8 (Fragment) n=1 Tax=Phoronis muelleri RepID=B2YI29_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.922e-08
N-terminus
sp_v3.0_unigene200132 SustainPine v3.0 465
• AutoFact: Pyruvate dehydrogenase E1 component subunit beta, mitochondrial n=3 Tax=Caenorhabditis RepID=ODPB_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate dehydrogenase E1 component subunit beta, mitochondrial 2.558e-08
Internal
sp_v3.0_unigene200145 SustainPine v3.0 465
• AutoFact: Ribosomal protein L7 (Fragment) n=2 Tax=Branchiostoma RepID=Q86LY5_BRALA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.992e-08
N-terminus
sp_v3.0_unigene200167 SustainPine v3.0 298
• AutoFact: Ribosomal protein L8 n=2 Tax=Chlamydomonadales RepID=A8IVK1_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
Putative C-terminus
sp_v3.0_unigene200234 SustainPine v3.0 296
• AutoFact: Ribosomal protein S3a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C281_9EUKA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyc07 3.703e-12
C-terminus
sp_v3.0_unigene200331 SustainPine v3.0 456
• AutoFact: 40S ribosomal protein rpS2e n=2 Tax=Tetrahymena thermophila RepID=E6PBS0_TETTH 1.4013e-45
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.121e-19
Putative C-terminus
sp_v3.0_unigene200339 SustainPine v3.0 501
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain