Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene193645 SustainPine v3.0 405
• AutoFact: rRNA 2'-O-methyltransferase fibrillarin n=6 Tax=Tetrapoda RepID=FBRL_XENLA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 1.134e-08
C-terminus
sp_v3.0_unigene193671 SustainPine v3.0 399
• AutoFact: Serine/threonine-protein phosphatase n=3 Tax=Nectriaceae RepID=A8DQZ8_GIBMO 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein phosphatase 0.0
Internal
sp_v3.0_unigene194491 SustainPine v3.0 309
• AutoFact: 40S ribosomal protein S17 n=1 Tax=Lycosa singoriensis RepID=A9QQ91_LYCSI 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S17-4 3.433e-12
Putative N-terminus
sp_v3.0_unigene195133 SustainPine v3.0 181
• Sma3: Histone H2B 3.961e-18
unknown
sp_v3.0_unigene195195 SustainPine v3.0 533
• AutoFact: Chromatin remodeling 38 n=5 Tax=Camelineae RepID=Q9M297_ARATH 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 3.305e-08
Putative C-terminus
sp_v3.0_unigene195356 SustainPine v3.0 306
• AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.56385e-42
Internal
sp_v3.0_unigene195366 SustainPine v3.0 304
• AutoFact: Protein argonaute 7 n=3 Tax=Oryza sativa RepID=AGO7_ORYSJ 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Argonaute protein group 1.402e-36
Internal
sp_v3.0_unigene195377 SustainPine v3.0 362
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEN4_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 5.928e-30
Internal
sp_v3.0_unigene196045 SustainPine v3.0 137
• AutoFact: 60S ribosomal protein L12 n=1 Tax=Zea mays RepID=B6T1W9_MAIZE 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 4.048e-15
N-terminus
sp_v3.0_unigene196426 SustainPine v3.0 336
• AutoFact: FACT complex subunit SPT16 n=4 Tax=Oryza sativa RepID=SPT16_ORYSJ 3.0e-27
• FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Facilitates chromatin transcription complex subunit SPT16 2.662e-13
Internal
sp_v3.0_unigene196441 SustainPine v3.0 403
• AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin-related protein 4 1.39e-08
Putative N-terminus
sp_v3.0_unigene198325 SustainPine v3.0 419
• AutoFact: Prohibitin-1 n=4 Tax=Pleosporineae RepID=B2WN38_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Prohibitin 7.379e-38
Putative C-terminus
sp_v3.0_unigene198386 SustainPine v3.0 539
• AutoFact: Similar to 60S ribosomal protein L26 n=1 Tax=Leptosphaeria maculans RepID=E4ZLM9_LEPMC 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.437e-11
Putative Complete
sp_v3.0_unigene198392 SustainPine v3.0 524
• AutoFact: 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] gb|EAU92440.1| 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Putative Complete
sp_v3.0_unigene198442 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L7 n=4 Tax=Pleosporineae RepID=B2WF45_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 2.196e-11
C-terminus
sp_v3.0_unigene198480 SustainPine v3.0 286
• AutoFact: 60S ribosomal protein L23, putative n=6 Tax=Plasmodium RepID=A5K7W5_PLAVS 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 2.274e-11
N-terminus
sp_v3.0_unigene198488 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L21 n=4 Tax=Pucciniales RepID=E3K971_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.182e-10
Putative Complete
sp_v3.0_unigene198541 SustainPine v3.0 559
• AutoFact: 60s ribosomal protein l11 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_773228.1| hypothetical protein CNBJ0070 [Cryptococcus neoformans var. neoformans B-3501A] ref|XP_003196328.1| 60s ribosomal protein L11 [Cryptococcus gattii WM276] gb|EAL1858 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative Complete
sp_v3.0_unigene198912 SustainPine v3.0 470
• AutoFact: Ribosomal protein L19 n=1 Tax=Naegleria gruberi RepID=D2VC39_NAEGR 3.0e-36
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene199651 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 1.0e-21
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.052e-33
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain