Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene21674 SustainPine v3.0 2205
AutoFact: Heat shock protein 81-1 n=55 Tax=Magnoliophyta RepID=HSP81_ORYSJ 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene21710 SustainPine v3.0 1190
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.79e-08
Putative Complete
sp_v3.0_unigene21734 SustainPine v3.0 574
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene21736 SustainPine v3.0 393
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.247e-08
Putative C-terminus
sp_v3.0_unigene21738 SustainPine v3.0 1113
AutoFact: Polyubiquitin-C n=586 Tax=cellular organisms RepID=UBC_HUMAN 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.599e-08
Putative Complete
sp_v3.0_unigene21739 SustainPine v3.0 723
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.339e-07
Putative Complete
sp_v3.0_unigene21741 SustainPine v3.0 829
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.869e-08
Putative Complete
sp_v3.0_unigene21742 SustainPine v3.0 1020
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene21790 SustainPine v3.0 716
AutoFact: FACT complex subunit SPT16 n=4 Tax=Oryza sativa RepID=SPT16_ORYSJ 7.0e-28
FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Facilitates chromatin transcription complex subunit SPT16 2.911e-13
N-terminus
sp_v3.0_unigene21842 SustainPine v3.0 603
AutoFact: 40S ribosomal protein S13 n=4 Tax=Schizosaccharomyces RepID=RS13_SCHPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.85e-14
Complete
sp_v3.0_unigene21843 SustainPine v3.0 625
AutoFact: Nucleolar protein Nop56 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W2L1_9STRA 0.0
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein 7.218e-14
Internal
sp_v3.0_unigene21846 SustainPine v3.0 457
AutoFact: 60S ribosomal protein L2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9LLS6_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene21848 SustainPine v3.0 784
AutoFact: 40S ribosomal protein S3 n=33 Tax=Eukaryota RepID=RS3_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.23e-10
Complete
sp_v3.0_unigene21852 SustainPine v3.0 650
AutoFact: 3-ketoacyl-CoA thiolase n=47 Tax=Pseudomonas RepID=FADA_PSE14 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-ketoacyl-CoA thiolase 1.129e-11
Internal
sp_v3.0_unigene21863 SustainPine v3.0 528
AutoFact: Fiber protein Fb9 (Fragment) n=1 Tax=Gossypium barbadense RepID=Q8GT83_GOSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 1.033e-29
C-terminus
sp_v3.0_unigene21864 SustainPine v3.0 567
AutoFact: Glucose-regulated protein 78, putative n=9 Tax=Trypanosoma RepID=Q384Q5_9TRYP 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 1.992e-28
C-terminus
sp_v3.0_unigene21870 SustainPine v3.0 391
AutoFact: Ribosomal protein L5 (Fragment) n=1 Tax=Branchiostoma lanceolatum RepID=Q86LY6_BRALA 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene21881 SustainPine v3.0 665
AutoFact: Ribosomal protein L12 n=1 Tax=Anthopleura elegantissima RepID=Q2LGN5_ANTEL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene21903 SustainPine v3.0 562
AutoFact: Cyc07-like protein n=1 Tax=Solanum tuberosum RepID=Q2XPW5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.032e-17
Putative Complete
sp_v3.0_unigene21913 SustainPine v3.0 474
AutoFact: 60S ribosomal protein L12 n=3 Tax=Caenorhabditis RepID=RL12_CAEEL 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L12 7.917e-19
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain