Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13205 SustainPine v3.0 2381
• AutoFact: protein serine/threonine kinase [Lophopyrum elongatum] gb|AAK11674.1|AF339747_1 protein kinase [Lophopyrum elongatum] 0.0
• FL-Next: sp=Probable receptor-like protein kinase At5g47070; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein kinase APK1B, chloroplast, putative 1.177e-34
Complete
sp_v3.0_unigene13356 SustainPine v3.0 777
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RMK6_RICCO 2.0e-38
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein phosphatase 2a, regulatory subunit, putative 5.409e-22
C-terminus
sp_v3.0_unigene13372 SustainPine v3.0 1112
• AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.25696e-42
Putative C-terminus
sp_v3.0_unigene13534 SustainPine v3.0 471
• AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.9937e-43
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rna-dependent RNA polymerase 1.429e-19
Internal
sp_v3.0_unigene13614 SustainPine v3.0 1127
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative Complete
sp_v3.0_unigene13626 SustainPine v3.0 413
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.663e-20
Internal
sp_v3.0_unigene13792 SustainPine v3.0 908
• AutoFact: Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU 0.0
• FL-Next: tr=Luminal binding protein; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Heat shock protein 70 0.0
N-terminus
sp_v3.0_unigene14098 SustainPine v3.0 1013
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase APK1B, chloroplast, putative 6.808e-32
C-terminus
sp_v3.0_unigene14106 SustainPine v3.0 701
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase G11A 2.679e-11
N-terminus
sp_v3.0_unigene14176 SustainPine v3.0 457
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.0e-31
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene14220 SustainPine v3.0 903
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14612 SustainPine v3.0 475
• AutoFact: Receptor for egg jelly protein 9 n=1 Tax=Strongylocentrotus purpuratus RepID=A2TIR8_STRPU 4.0e-05
• Sma3: Putative snRNP protein 9.837e-09
coding
sp_v3.0_unigene14672 SustainPine v3.0 1280
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene14723 SustainPine v3.0 1368
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene14729 SustainPine v3.0 530
• AutoFact: 40S ribosomal protein S9 n=2 Tax=Rhizoctonia solani RepID=A5X2M3_THACU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.26117e-44
Putative C-terminus
sp_v3.0_unigene14931 SustainPine v3.0 453
• AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14994 SustainPine v3.0 933
• AutoFact: AGC (CAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein n=2 Tax=Arabidopsis RepID=Q9LT38_ARATH 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 8.715e-35
Internal
sp_v3.0_unigene15187 SustainPine v3.0 1863
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative RNA-binding protein 2.882e-08
Complete
sp_v3.0_unigene15261 SustainPine v3.0 444
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.121e-19
C-terminus
sp_v3.0_unigene15801 SustainPine v3.0 2356
• AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 1.649e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain