Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ribonuclease H activity

Term: GO:0004523  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene163823 SustainPine v3.0 327
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene163921 SustainPine v3.0 230
AutoFact: equilibrative nucleoside transporter 4 [Arabidopsis thaliana] gb|AAL25097.1|AF426401_1 putative equilibrative nucleoside transporter ENT4 [Arabidopsis thaliana] emb|CAB81055.1| putative protein [Arabidopsis thaliana] gb|AEE82482.1| equilibrative nucleosid 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Equilibrative nucleoside transporter 1.327e-22
Internal
sp_v3.0_unigene164651 SustainPine v3.0 265
AutoFact: Integrase (Fragment) n=5 Tax=Oryza RepID=Q9LL04_9ORYZ 4.0e-19
FL-Next: tr=OO_Ba0005L10-OO_Ba0081K17.19 protein; Oryza officinalis. 0.0
Sma3: Integrase 6.247e-31
Internal
sp_v3.0_unigene165939 SustainPine v3.0 454
AutoFact: Ribosomal protein L13A n=1 Tax=Schizophyllum commune H4-8 RepID=D8PQN7_SCHCM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 2.632e-20
C-terminus
sp_v3.0_unigene167523 SustainPine v3.0 286
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-21
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene167950 SustainPine v3.0 267
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 1.0e-23
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene183384 SustainPine v3.0 492
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.607e-15
Internal
sp_v3.0_unigene183950 SustainPine v3.0 1021
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.609e-09
N-terminus
sp_v3.0_unigene184406 SustainPine v3.0 759
AutoFact: 60S ribosomal protein L16-A [Lodderomyces elongisporus NRRL YB-4239] gb|EDK43281.1| 60S ribosomal protein L16-A [Lodderomyces elongisporus NRRL YB-4239] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 5.409e-21
Complete
sp_v3.0_unigene188442 SustainPine v3.0 411
AutoFact: 60S ribosomal protein L13, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MU72_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 7.865e-21
N-terminus
sp_v3.0_unigene194161 SustainPine v3.0 633
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q2R4I0_ORYSJ 7.0e-28
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene199038 SustainPine v3.0 318
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
Sma3: RNA-directed DNA polymerase (Reverse transcriptase) 3.95e-14
Internal
sp_v3.0_unigene199189 SustainPine v3.0 579
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.243e-09
Putative Complete
sp_v3.0_unigene201110 SustainPine v3.0 381
AutoFact: Unassigned protein
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene201124 SustainPine v3.0 298
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q7XFT0_ORYSJ 5.0e-24
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 0.0
Putative C-terminus
sp_v3.0_unigene203228 SustainPine v3.0 464
AutoFact: Ribonuclease H n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SJJ9_THEM7 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative RNase 8.772e-06
N-terminus
sp_v3.0_unigene203677 SustainPine v3.0 447
AutoFact: GRAM domain containing protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 2.585e-36
C-terminus
sp_v3.0_unigene208580 SustainPine v3.0 396
AutoFact: Equilibrative nucleoside transporter (Fragment) n=1 Tax=Populus trichocarpa RepID=B9INU8_POPTR 3.00004e-41
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Equilibrative nucleoside transporter 6.493e-22
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain