Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene149298
|
SustainPine v3.0
|
278
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q338J6_ORYSJ
|
4.0e-21
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.954e-10
|
|
Internal
|
sp_v3.0_unigene149377
|
SustainPine v3.0
|
307
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R0F6_ORYSJ
|
2.0e-24
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
4.859e-07
|
|
Putative C-terminus
|
sp_v3.0_unigene149560
|
SustainPine v3.0
|
163
|
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE
|
5.0e-18
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.28e-14
|
|
Internal
|
sp_v3.0_unigene149774
|
SustainPine v3.0
|
428
|
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH
|
3.00018e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
7.028e-13
|
|
Internal
|
sp_v3.0_unigene149924
|
SustainPine v3.0
|
216
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
2.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.781e-14
|
|
Internal
|
sp_v3.0_unigene151751
|
SustainPine v3.0
|
243
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3J5_ORYSJ
|
3.0e-16
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
3.369e-28
|
|
Internal
|
sp_v3.0_unigene159602
|
SustainPine v3.0
|
301
|
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE
|
3.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.755e-10
|
|
Internal
|
sp_v3.0_unigene159774
|
SustainPine v3.0
|
444
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
3.0e-18
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.163e-06
|
|
Internal
|
sp_v3.0_unigene159780
|
SustainPine v3.0
|
358
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y1L8_ORYSJ
|
5.0e-14
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.029e-06
|
|
Putative C-terminus
|
sp_v3.0_unigene160116
|
SustainPine v3.0
|
323
|
• AutoFact: rve domain containing protein
|
8.0e-15
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
8.834e-17
|
|
Internal
|
sp_v3.0_unigene160196
|
SustainPine v3.0
|
345
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q338J6_ORYSJ
|
2.0e-21
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.332e-08
|
|
C-terminus
|
sp_v3.0_unigene160477
|
SustainPine v3.0
|
235
|
• AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA
|
4.0e-14
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.407e-07
|
|
Internal
|
sp_v3.0_unigene160483
|
SustainPine v3.0
|
408
|
• AutoFact: NV19190; similar to pol polyprotein
|
3.0e-24
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
3.213e-07
|
|
N-terminus
|
sp_v3.0_unigene160850
|
SustainPine v3.0
|
275
|
• AutoFact: OSJNBa0019K04.23 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XTX5_ORYSJ
|
8.0e-25
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
0.0
|
|
Internal
|
sp_v3.0_unigene161365
|
SustainPine v3.0
|
483
|
• AutoFact: Unassigned protein
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
7.181e-06
|
|
Internal
|
sp_v3.0_unigene161426
|
SustainPine v3.0
|
473
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R1D8_ORYSJ
|
3.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.4055e-42
|
|
Internal
|
sp_v3.0_unigene161429
|
SustainPine v3.0
|
249
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB
|
6.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.068e-18
|
|
Internal
|
sp_v3.0_unigene161510
|
SustainPine v3.0
|
482
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
2.8026e-45
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.467e-17
|
|
C-terminus
|
sp_v3.0_unigene161597
|
SustainPine v3.0
|
424
|
• AutoFact: putative gag-pol polyprotein [Oryza sativa Japonica Group] gb|ABF96256.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
|
4.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
8.591e-07
|
|
Internal
|
sp_v3.0_unigene161665
|
SustainPine v3.0
|
462
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
1.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.2e-07
|
|
Internal
|