Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, unclassified

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58941 SustainPine v3.0 230
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.026e-06
Internal
sp_v3.0_unigene59421 SustainPine v3.0 417
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.962e-06
Internal
sp_v3.0_unigene59470 SustainPine v3.0 335
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.765e-14
Putative C-terminus
sp_v3.0_unigene59575 SustainPine v3.0 215
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLN6_ORYSJ 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.652e-24
Putative Complete
sp_v3.0_unigene60129 SustainPine v3.0 316
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 4.0e-21
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.115e-07
Internal
sp_v3.0_unigene60459 SustainPine v3.0 136
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-07
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.057e-10
Internal
sp_v3.0_unigene60714 SustainPine v3.0 294
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.687e-06
Internal
sp_v3.0_unigene61747 SustainPine v3.0 240
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.201e-12
Internal
sp_v3.0_unigene62013 SustainPine v3.0 235
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.319e-10
Internal
sp_v3.0_unigene62046 SustainPine v3.0 246
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FW76_ORYSJ 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.938e-09
Putative N-terminus
sp_v3.0_unigene62093 SustainPine v3.0 289
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.736e-06
Internal
sp_v3.0_unigene62126 SustainPine v3.0 249
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9XE44_ARATH 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.013e-09
Putative Complete
sp_v3.0_unigene62561 SustainPine v3.0 237
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.636e-10
Internal
sp_v3.0_unigene62605 SustainPine v3.0 290
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Camponotus floridanus RepID=E2AKP5_9HYME 3.0e-23
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.443e-16
Putative C-terminus
sp_v3.0_unigene63026 SustainPine v3.0 273
AutoFact: polyprotein [Glycine max] 3.0e-20
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.419e-17
Internal
sp_v3.0_unigene63128 SustainPine v3.0 180
AutoFact: Os11g0224300 protein (Fragment) n=2 Tax=Oryza sativa Japonica Group RepID=Q0ITS1_ORYSJ 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.032e-06
Internal
sp_v3.0_unigene63899 SustainPine v3.0 279
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.462e-13
Internal
sp_v3.0_unigene64021 SustainPine v3.0 341
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 2.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.812e-17
Putative C-terminus
sp_v3.0_unigene64498 SustainPine v3.0 245
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.123e-09
Putative Complete
sp_v3.0_unigene65995 SustainPine v3.0 264
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.101e-08
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain