Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12310 SustainPine v3.0 702
• AutoFact: Unassigned protein
• FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Repressor of silencing 1 1.922e-08
Putative C-terminus
sp_v3.0_unigene12483 SustainPine v3.0 894
• AutoFact: PAZ multi-domain protein 2.0e-31
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 3.573e-16
Internal
sp_v3.0_unigene12576 SustainPine v3.0 2608
• AutoFact: Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE851 0.0
• FL-Next: tr=Os05g0163000 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Arginyl-tRNA synthetase 1.309e-28
Complete
sp_v3.0_unigene12787 SustainPine v3.0 1686
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
• FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 2.903e-11
Putative C-terminus
sp_v3.0_unigene12869 SustainPine v3.0 1139
• AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Threonyl-tRNA synthetase, putative 3.983e-08
C-terminus
sp_v3.0_unigene12900 SustainPine v3.0 751
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_261, whole genome shotgun sequence 7.889e-15
N-terminus
sp_v3.0_unigene12950 SustainPine v3.0 981
• AutoFact: cytokinin-regulated kinase 1 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase APK1A 3.156e-11
Putative C-terminus
sp_v3.0_unigene13064 SustainPine v3.0 634
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 4.268e-31
C-terminus
sp_v3.0_unigene13171 SustainPine v3.0 1515
• AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
• FL-Next: sp=Actin-related protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Actin-related protein ARP7 1.114e-09
Complete
sp_v3.0_unigene13499 SustainPine v3.0 1099
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Complete
sp_v3.0_unigene13504 SustainPine v3.0 3034
• AutoFact: putative protein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin dependent kinase 1.791e-13
C-terminus
sp_v3.0_unigene13742 SustainPine v3.0 1819
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Peroxisome biogenesis factor 10 4.688e-09
Complete
sp_v3.0_unigene13762 SustainPine v3.0 1457
• AutoFact: diacylglycerol acyltransferase [Glycine max] 0.0
• FL-Next: sp=Diacylglycerol O-acyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Diacylglycerol acyltransferase 4.875e-33
C-terminus
sp_v3.0_unigene13805 SustainPine v3.0 671
• AutoFact: Somatic embryogenesis receptor kinase-like protein 3 n=1 Tax=Medicago truncatula RepID=E2IXG7_MEDTR 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 3.476e-16
N-terminus
sp_v3.0_unigene13865 SustainPine v3.0 574
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
• Sma3: Jumonji domain protein 2.383e-10
Internal
sp_v3.0_unigene14103 SustainPine v3.0 1195
• AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 1.975e-24
N-terminus
sp_v3.0_unigene14577 SustainPine v3.0 1283
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.517e-14
Putative Complete
sp_v3.0_unigene14702 SustainPine v3.0 561
• AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene14878 SustainPine v3.0 872
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 3.902e-17
C-terminus
sp_v3.0_unigene14965 SustainPine v3.0 853
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.237e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain