Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142207 SustainPine v3.0 383
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene142276 SustainPine v3.0 610
• AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene142423 SustainPine v3.0 560
• AutoFact: pfam12937, F-box-like, F-box-like 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_261, whole genome shotgun sequence 3.873e-19
N-terminus
sp_v3.0_unigene142470 SustainPine v3.0 450
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.611e-08
C-terminus
sp_v3.0_unigene142484 SustainPine v3.0 320
• AutoFact: Pentatricopeptide, putative n=3 Tax=Oryza sativa RepID=Q10MA5_ORYSJ 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142641 SustainPine v3.0 360
• AutoFact: 30S ribosomal protein S16 n=1 Tax=Medicago truncatula RepID=B3IWG1_MEDTR 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S16 4.275e-18
Putative N-terminus
sp_v3.0_unigene142749 SustainPine v3.0 470
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene142804 SustainPine v3.0 410
• AutoFact: dynamin-like protein C [Arabidopsis thaliana] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 2.215e-17
C-terminus
sp_v3.0_unigene142810 SustainPine v3.0 504
• AutoFact: Peroxisomal ascorbate peroxidase n=1 Tax=Cucurbita cv. Kurokawa Amakuri RepID=Q948P1_9ROSI 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ascorbate peroxidase 0.0
Misassembled
sp_v3.0_unigene143321 SustainPine v3.0 509
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene143405 SustainPine v3.0 466
• AutoFact: Ascorbate peroxidase n=3 Tax=Pinaceae RepID=Q6RY58_PINPS 0.0
• FL-Next: tr=Ascorbate peroxidase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Ascorbate peroxidase 0.0
Internal
sp_v3.0_unigene143430 SustainPine v3.0 759
• AutoFact: 26S proteasome regulatory subunit N8 [Arabidopsis thaliana] sp|O24412.1|PSD7_ARATH RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit 7; AltName: Full=26S proteasome regulatory subunit rpn8; AltName: Full=Protein MOV34 gb|AAK55681.1|AF378 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene143453 SustainPine v3.0 478
• AutoFact: Caleosin n=1 Tax=Cycas revoluta RepID=B8XX15_CYCRE 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caleosin 1.684e-25
N-terminus
sp_v3.0_unigene143499 SustainPine v3.0 502
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.659e-31
C-terminus
sp_v3.0_unigene143564 SustainPine v3.0 465
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 4.16186e-43
Internal
sp_v3.0_unigene143862 SustainPine v3.0 308
• AutoFact: RAD-like 5 protein [Arabidopsis thaliana] dbj|BAC43610.1| putative myb-related protein [Arabidopsis thaliana] gb|AAO64077.1| putative myb family transcription factor [Arabidopsis thaliana] gb|AAS09994.1| MYB transcription factor [Arabidopsis thaliana] gb| 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 9.504e-10
Putative Complete
sp_v3.0_unigene143869 SustainPine v3.0 644
• AutoFact: Cyclin-dependent kinase B2-2 n=2 Tax=Arabidopsis RepID=CKB22_ARATH 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin-dependent kinase 4.29e-14
C-terminus
sp_v3.0_unigene143875 SustainPine v3.0 339
• AutoFact: RAD-like 5 protein [Arabidopsis thaliana] dbj|BAC43610.1| putative myb-related protein [Arabidopsis thaliana] gb|AAO64077.1| putative myb family transcription factor [Arabidopsis thaliana] gb|AAS09994.1| MYB transcription factor [Arabidopsis thaliana] gb| 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 5.672e-09
Putative Complete
sp_v3.0_unigene143879 SustainPine v3.0 422
• AutoFact: Leucine-rich repeat protein n=1 Tax=Solenostemon scutellarioides RepID=C1K240_SOLSC 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat protein 1.804e-19
N-terminus
sp_v3.0_unigene144359 SustainPine v3.0 615
• AutoFact: Phospholipase D n=1 Tax=Citrus sinensis RepID=B2L042_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 8.355e-30
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain