Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene50914 SustainPine v3.0 208
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SA76.1|PPR64_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g30610, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2279; Flags: Precursor gb|AAD25748.1|AC00 4.0e-18
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g30610, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50994 SustainPine v3.0 415
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RIP1_RICCO 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.34e-14
C-terminus
sp_v3.0_unigene51135 SustainPine v3.0 474
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene51229 SustainPine v3.0 260
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 4.959e-09
Internal
sp_v3.0_unigene51811 SustainPine v3.0 446
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 9.123e-10
Internal
sp_v3.0_unigene51820 SustainPine v3.0 242
• AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 3.0e-16
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase 4.191e-08
Internal
sp_v3.0_unigene51831 SustainPine v3.0 495
• AutoFact: Calpain-type cysteine protease n=4 Tax=Arabidopsis RepID=F4I0A4_ARATH 1.0e-38
• FL-Next: tr=Calpain-type cysteine protease; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Phytocalpain 1.818e-09
Internal
sp_v3.0_unigene51868 SustainPine v3.0 445
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.156e-15
C-terminus
sp_v3.0_unigene51889 SustainPine v3.0 431
• AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.563e-11
Internal
sp_v3.0_unigene52010 SustainPine v3.0 484
• AutoFact: cell cycle dependent kinase type B (IC) [Ostreococcus tauri] gb|AAV68596.1| cell cycle dependent kinase B [Ostreococcus tauri] emb|CAL57486.1| cell cycle dependent kinase type B (IC) [Ostreococcus tauri] 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division control protein 2 2.82e-12
C-terminus
sp_v3.0_unigene52012 SustainPine v3.0 212
• AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 8.0e-30
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.712e-08
Internal
sp_v3.0_unigene52120 SustainPine v3.0 401
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RAZ1_RICCO 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 1.722e-15
Internal
sp_v3.0_unigene52147 SustainPine v3.0 285
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.687e-09
Internal
sp_v3.0_unigene52238 SustainPine v3.0 420
• AutoFact: Nucleotidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RD63_RICCO 2.0e-24
• FL-Next: tr=Nucleotidyltransferase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene52446 SustainPine v3.0 273
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene52528 SustainPine v3.0 268
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610 dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75843.1| pentatricope 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.189e-14
Internal
sp_v3.0_unigene52584 SustainPine v3.0 282
• AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 4.0e-20
• FL-Next: sp=Actin-related protein 7; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Actin-related protein ARP7 1.318e-09
Internal
sp_v3.0_unigene52825 SustainPine v3.0 443
• AutoFact: protein PINHEAD [Arabidopsis thaliana] ref|NP_001190464.1| protein PINHEAD [Arabidopsis thaliana] sp|Q9XGW1.1|AGO10_ARATH RecName: Full=Protein argonaute 10; AltName: Full=Protein PINHEAD; AltName: Full=Protein ZWILLE gb|AAD40098.1|AF154272_1 PINHEAD [Ara 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Argonaute protein group 1.91e-16
Internal
sp_v3.0_unigene52869 SustainPine v3.0 322
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene52989 SustainPine v3.0 212
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor emb|CAB511 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 5.013e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain