Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene47270 SustainPine v3.0 143
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 7.0e-07
• FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
• Sma3: ATP-dependent RNA helicase, putative 5.304e-14
Internal
sp_v3.0_unigene47623 SustainPine v3.0 343
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.188e-30
Internal
sp_v3.0_unigene47915 SustainPine v3.0 1071
• AutoFact: FAD-linked oxidoreductase 1 n=1 Tax=Glycine max RepID=Q2PMD5_SOYBN 0.0
• FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
• Sma3: Reticuline oxidase, putative 9.251e-31
Putative C-terminus
sp_v3.0_unigene48078 SustainPine v3.0 402
• AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene48141 SustainPine v3.0 931
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.719e-16
C-terminus
sp_v3.0_unigene48438 SustainPine v3.0 317
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510 dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana] gb|AAT85758.1| At5g08510 [Arabido 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.078e-08
Internal
sp_v3.0_unigene48448 SustainPine v3.0 421
• AutoFact: RING-H2 finger protein ATL3 n=3 Tax=Arabidopsis RepID=ATL3_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 1.367e-12
Internal
sp_v3.0_unigene48555 SustainPine v3.0 384
• AutoFact: maternal effect embryo arrest 50 protein [Arabidopsis thaliana] gb|AAC19301.1| contains similarity to mouse brain protein E46 (GB:X61506) [Arabidopsis thaliana] dbj|BAC42890.1| unknown protein [Arabidopsis thaliana] gb|AAO63953.1| unknown protein [Arabido 2.0e-29
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene48711 SustainPine v3.0 142
• AutoFact: Phospholipase D beta 1 isoform 1b n=3 Tax=Gossypium hirsutum RepID=Q8H1U1_GOSHI 3.0e-12
• FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase d beta, putative 2.022e-11
Internal
sp_v3.0_unigene49191 SustainPine v3.0 304
• AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49263 SustainPine v3.0 279
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.347e-14
C-terminus
sp_v3.0_unigene49389 SustainPine v3.0 221
• AutoFact: dynamin-like protein E [Arabidopsis thaliana] emb|CAB75934.1| dynamin-like protein 4 (ADL4) [Arabidopsis thaliana] 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 2.826e-17
Internal
sp_v3.0_unigene49439 SustainPine v3.0 403
• AutoFact: putative leucyl-tRNA synthetase [Oryza sativa Japonica Group] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene49445 SustainPine v3.0 523
• AutoFact: Glutathione peroxidase n=1 Tax=Picea sitchensis RepID=A9NS67_PICSI 1.0e-37
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene49736 SustainPine v3.0 410
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.21e-31
C-terminus
sp_v3.0_unigene49779 SustainPine v3.0 511
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.183e-10
Putative N-terminus
sp_v3.0_unigene50183 SustainPine v3.0 614
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.902e-14
C-terminus
sp_v3.0_unigene50541 SustainPine v3.0 161
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene50637 SustainPine v3.0 416
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor gb|AAF78482.1|AC012187_2 Contains similarity to an unknown prot 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene50691 SustainPine v3.0 208
• AutoFact: cullin 1C [Nicotiana tabacum] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 6.495e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain