Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35261 SustainPine v3.0 562
• AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene35502 SustainPine v3.0 1206
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene36154 SustainPine v3.0 1023
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene36461 SustainPine v3.0 532
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene37134 SustainPine v3.0 495
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.84e-08
Putative N-terminus
sp_v3.0_unigene37177 SustainPine v3.0 274
• AutoFact: cullin 1A [Nicotiana tabacum] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 6.254e-08
Internal
sp_v3.0_unigene37298 SustainPine v3.0 495
• AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Valyl-tRNA synthetase, putative 9.958e-15
Internal
sp_v3.0_unigene37367 SustainPine v3.0 1443
• AutoFact: Pyrroline-5-carboxylate synthetase n=1 Tax=Gossypium arboreum RepID=B1A2U9_GOSAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyrroline-5-carboxylate synthetase 2.678e-33
C-terminus
sp_v3.0_unigene37411 SustainPine v3.0 729
• AutoFact: Os06g0130100 protein n=4 Tax=Oryza sativa RepID=Q7XB99_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 5.855e-24
Putative C-terminus
sp_v3.0_unigene37516 SustainPine v3.0 822
• AutoFact: golgi complex component-related protein [Arabidopsis thaliana] dbj|BAB09754.1| unnamed protein product [Arabidopsis thaliana] gb|AED96080.1| golgi complex component-related protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene37584 SustainPine v3.0 3858
• AutoFact: Phospholipase D n=1 Tax=Picea sitchensis RepID=B8LQ49_PICSI 0.0
• FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 6.055e-33
Complete
sp_v3.0_unigene37610 SustainPine v3.0 948
• AutoFact: Pantoate-beta-alanine ligase, putative n=1 Tax=Ricinus communis RepID=B9S544_RICCO 2.0e-32
• FL-Next: sp=Pantoate--beta-alanine ligase; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Pantothenate synthetase 1.15e-17
C-terminus
sp_v3.0_unigene37623 SustainPine v3.0 1441
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative RNA helicase 2.626e-14
Complete
sp_v3.0_unigene37973 SustainPine v3.0 1657
• AutoFact: Thylakoid-bound ascorbate peroxidase n=2 Tax=Cucurbita cv. Kurokawa Amakuri RepID=O04873_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ascorbate peroxidase 0.0
Complete
sp_v3.0_unigene39263 SustainPine v3.0 478
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene39302 SustainPine v3.0 413
• AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene39480 SustainPine v3.0 212
• AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene39581 SustainPine v3.0 262
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene39692 SustainPine v3.0 141
• AutoFact: transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAK64062.1| putative RB-binding protein [Arabidopsis thaliana] gb|AAS46255.1| putative RB-binding protein [Arabidopsis thaliana] gb|AEE34105.1| transcription factor ju 3.0e-21
• FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
• Sma3: Jumonji domain protein 3.228e-20
Internal
sp_v3.0_unigene40310 SustainPine v3.0 132
• AutoFact: cullin 1A [Nicotiana tabacum] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain