Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: seed germination

Term: GO:0009845  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene130136 SustainPine v3.0 422
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GK99_POPTR 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 1.224e-38
N-terminus
sp_v3.0_unigene130397 SustainPine v3.0 345
• AutoFact: Phospholipase D n=1 Tax=Picea sitchensis RepID=B8LQ49_PICSI 3.0e-19
• FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 4.862e-31
Internal
sp_v3.0_unigene131284 SustainPine v3.0 644
• AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 2.399e-26
Putative C-terminus
sp_v3.0_unigene132844 SustainPine v3.0 483
• AutoFact: Protein kinase-like resistance protein (Fragment) n=5 Tax=Magnoliophyta RepID=A9QXP2_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 3.026e-32
Internal
sp_v3.0_unigene134758 SustainPine v3.0 220
• AutoFact: AP2 protein n=1 Tax=Elaeis guineensis RepID=A9JQY7_ELAGV 1.0e-32
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene135834 SustainPine v3.0 275
• AutoFact: D-xylose-proton symporter-like 1 [Arabidopsis thaliana] sp|Q8L6Z8.1|XYLL1_ARATH RecName: Full=D-xylose-proton symporter-like 1 gb|AAM98195.1| unknown protein [Arabidopsis thaliana] gb|AAQ56818.1| At3g03090 [Arabidopsis thaliana] gb|AEE73900.1| D-xylose-pr 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative sugar transporter protein 3.145e-07
Putative C-terminus
sp_v3.0_unigene136868 SustainPine v3.0 293
• AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 9.656e-27
Internal
sp_v3.0_unigene140667 SustainPine v3.0 856
• AutoFact: Phospholipase D n=2 Tax=Papaver somniferum RepID=Q8VWE9_PAPSO 0.0
• FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D alpha 1 2.009e-31
Putative N-terminus
sp_v3.0_unigene140927 SustainPine v3.0 327
• AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 4.0e-35
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene143550 SustainPine v3.0 274
• AutoFact: ovule development aintegumenta-like protein BNM3 [Oryza sativa] 7.0e-32
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene144283 SustainPine v3.0 646
• AutoFact: Phospholipase D n=5 Tax=Gossypium RepID=B5B3R1_GOSAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 1.552e-34
C-terminus
sp_v3.0_unigene144359 SustainPine v3.0 615
• AutoFact: Phospholipase D n=1 Tax=Citrus sinensis RepID=B2L042_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 8.355e-30
C-terminus
sp_v3.0_unigene145284 SustainPine v3.0 1207
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-13
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 3.042e-30
C-terminus
sp_v3.0_unigene146180 SustainPine v3.0 1024
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-36
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene146440 SustainPine v3.0 438
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 6.0e-30
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene146616 SustainPine v3.0 414
• AutoFact: Drf_FH1 multi-domain protein 2.0e-13
• Sma3: Extensin 1.687e-16
coding
sp_v3.0_unigene146647 SustainPine v3.0 761
• AutoFact: Drf_FH1 multi-domain protein 2.0e-26
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene146720 SustainPine v3.0 675
• AutoFact: PREDICTED: similar to Blastula protease-10 [Strongylocentrotus purpuratus] ref|XP_001193078.1| PREDICTED: similar to Blastula protease-10 [Strongylocentrotus purpuratus] 8.0e-05
• Sma3: Extensin 3.284e-16
coding
sp_v3.0_unigene146741 SustainPine v3.0 734
• AutoFact: PREDICTED: similar to Blastula protease-10 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E46530 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Extensin 3.857e-28
Putative C-terminus
sp_v3.0_unigene146793 SustainPine v3.0 343
• AutoFact: Extensin_2 multi-domain protein 3.0e-13
• Sma3: Extensin 2.956e-26
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain