Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cellular component organization

Term: GO:0016043  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16 SustainPine v3.0 3247
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glycine-rich protein 1.501e-14
Complete
sp_v3.0_unigene952 SustainPine v3.0 1949
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Formin-like protein 12 2.516e-08
Putative C-terminus
sp_v3.0_unigene1314 SustainPine v3.0 2126
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin binding protein, putative 1.462e-09
C-terminus
sp_v3.0_unigene1820 SustainPine v3.0 838
AutoFact: Drf_FH1 multi-domain protein 6.0e-18
coding
sp_v3.0_unigene1879 SustainPine v3.0 3620
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene2336 SustainPine v3.0 587
AutoFact: FAP multi-domain protein 2.0e-15
Sma3: Anther-specific proline rich protein 1.837e-06
coding
sp_v3.0_unigene2766 SustainPine v3.0 1963
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Formin-like protein 12 2.673e-08
Putative C-terminus
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene6263 SustainPine v3.0 2454
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Formin-like protein 11 5.347e-08
C-terminus
sp_v3.0_unigene8282 SustainPine v3.0 1479
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 7.0e-29
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Formin-like protein 1 1.032e-08
C-terminus
sp_v3.0_unigene8358 SustainPine v3.0 1672
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin binding protein, putative 1.521e-09
C-terminus
sp_v3.0_unigene9710 SustainPine v3.0 631
AutoFact: formin homology 2 domain-containing protein 5 [Arabidopsis thaliana] gb|AAT37554.1| formin homology 2 domain-containing protein 5 [Arabidopsis thaliana] 2.0e-29
FL-Next: sp=Formin-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Formin-like protein 1 2.689e-08
Internal
sp_v3.0_unigene10823 SustainPine v3.0 829
AutoFact: FH protein NFH1 [Nicotiana tabacum] 3.0e-33
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene14603 SustainPine v3.0 549
AutoFact: Unassigned protein
FL-Next: sp=Formin-like protein 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene14680 SustainPine v3.0 234
AutoFact: FAP multi-domain protein 1.0e-10
Sma3: Putative glycine-rich cell wall structural protein 1.383e-10
unknown
sp_v3.0_unigene16034 SustainPine v3.0 643
AutoFact: Drf_FH1 multi-domain protein 9.0e-18
Sma3: Glycine-rich protein 9.923e-13
coding
sp_v3.0_unigene17197 SustainPine v3.0 1459
AutoFact: Collagen multi-domain protein 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene30102 SustainPine v3.0 950
AutoFact: Drf_FH1 multi-domain protein 1.0e-21
Sma3: Glycine-rich protein 4.83e-14
coding
sp_v3.0_unigene30517 SustainPine v3.0 733
AutoFact: Drf_FH1 multi-domain protein 2.0e-20
Sma3: Glycine-rich protein 2.316e-14
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain