Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165130 SustainPine v3.0 228
• AutoFact: OSJNBa0035O13.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XSL7_ORYSJ 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.657e-22
Putative N-terminus
sp_v3.0_unigene165172 SustainPine v3.0 279
• AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9RVL9_RICCO 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydroflavonol 4-reductase 0.0
Putative N-terminus
sp_v3.0_unigene165180 SustainPine v3.0 268
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 2.296e-07
Internal
sp_v3.0_unigene165205 SustainPine v3.0 268
• AutoFact: Unassigned protein 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene165224 SustainPine v3.0 210
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53JQ7_ORYSJ 2.0e-15
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.965e-23
Internal
sp_v3.0_unigene165242 SustainPine v3.0 343
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene165308 SustainPine v3.0 442
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 7.0e-31
• FL-Next: tr=Retrotransposon gag protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene165328 SustainPine v3.0 305
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-18
• FL-Next: tr=Putative uncharacterized protein P0001A07.10; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.764e-06
Internal
sp_v3.0_unigene165391 SustainPine v3.0 312
• AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 1.0e-29
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cinnamoyl-CoA reductase 0.0
Internal
sp_v3.0_unigene165514 SustainPine v3.0 344
• AutoFact: rve domain containing protein 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 3.67e-09
Internal
sp_v3.0_unigene165584 SustainPine v3.0 349
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-30
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 6.854e-25
Internal
sp_v3.0_unigene165602 SustainPine v3.0 176
• AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.0e-18
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene165683 SustainPine v3.0 330
• AutoFact: N2227-like domain-containing protein [Arabidopsis thaliana] gb|AAM13869.1| unknown protein [Arabidopsis thaliana] gb|AAM91702.1| unknown protein [Arabidopsis thaliana] gb|AEC08644.1| N2227-like domain-containing protein [Arabidopsis thaliana] 2.0e-31
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Putative uncharacterized protein At2g32170 6.797e-10
C-terminus
sp_v3.0_unigene165718 SustainPine v3.0 494
• AutoFact: Unassigned protein
• FL-Next: tr=Mutant gag-pol polyprotein; Pisum sativum (Garden pea). 0.0
Internal
sp_v3.0_unigene165725 SustainPine v3.0 256
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165763 SustainPine v3.0 422
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 8.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene165765 SustainPine v3.0 368
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-38
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.311e-32
Putative C-terminus
sp_v3.0_unigene165811 SustainPine v3.0 407
• AutoFact: OSIGBa0118P15.5 protein n=1 Tax=Oryza sativa RepID=Q01KK6_ORYSA 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene165848 SustainPine v3.0 258
• AutoFact: Transcription factor jumonji domain-containing protein n=2 Tax=Arabidopsis RepID=D7KN75_ARALL 1.0e-27
• FL-Next: tr=Transcription factor jumonji domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: ENBP1 protein 3.421e-08
Internal
sp_v3.0_unigene165892 SustainPine v3.0 200
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 1.0e-16
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.368e-36
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain