Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene32173 SustainPine v3.0 483
AutoFact: casein kinase I-like protein [Arabidopsis thaliana] gb|AEC07749.1| casein kinase I-like protein [Arabidopsis thaliana] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 3.837e-16
C-terminus
sp_v3.0_unigene32453 SustainPine v3.0 1011
AutoFact: EVE domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene32634 SustainPine v3.0 515
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene32750 SustainPine v3.0 1029
AutoFact: putative zinc finger protein [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein HEXBP 1.023e-08
Putative Complete
sp_v3.0_unigene33013 SustainPine v3.0 354
AutoFact: Cinnamyl-alcohol dehydrogenase n=1 Tax=Brassica rapa subsp. campestris RepID=C3VI12_BRACM 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydroflavonol 4-reductase 0.0
N-terminus
sp_v3.0_unigene33650 SustainPine v3.0 786
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.844e-18
C-terminus
sp_v3.0_unigene33659 SustainPine v3.0 1080
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 8.99999e-40
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.805e-12
C-terminus
sp_v3.0_unigene33807 SustainPine v3.0 2898
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein 2.063e-24
Complete
sp_v3.0_unigene34038 SustainPine v3.0 2092
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene34244 SustainPine v3.0 766
AutoFact: Telomerase reverse transcriptase catalytic subunit n=12 Tax=Scilla peruviana RepID=Q1EG41_SCIPE 4.0e-19
FL-Next: sp=Telomerase reverse transcriptase; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene34357 SustainPine v3.0 2803
AutoFact: PLAC8 domain-containing protein [Arabidopsis thaliana] ref|NP_849503.1| PLAC8 domain-containing protein [Arabidopsis thaliana] ref|NP_849504.2| PLAC8 domain-containing protein [Arabidopsis thaliana] sp|Q8L7E9.1|MCAC1_ARATH RecName: Full=Protein MID1-COMPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase-like 1.049e-06
Complete
sp_v3.0_unigene34461 SustainPine v3.0 1607
AutoFact: Myosin_tail_1 multi-domain protein 7.0e-06
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene34479 SustainPine v3.0 2864
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 7.116e-09
Complete
sp_v3.0_unigene34533 SustainPine v3.0 392
AutoFact: AAA-ATPase-like protein n=9 Tax=Poaceae RepID=Q8LKV4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Suppressor of K+ transport growth defect-like protein 5.85e-07
Internal
sp_v3.0_unigene34624 SustainPine v3.0 925
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
Sma3: Putative DNA topoisomerase III beta 2.836e-08
Internal
sp_v3.0_unigene34660 SustainPine v3.0 1123
AutoFact: protein trichome birefringence-like 11 [Arabidopsis thaliana] gb|AAX23913.1| hypothetical protein At5g19160 [Arabidopsis thaliana] gb|AAZ52758.1| expressed protein [Arabidopsis thaliana] gb|AAZ52759.1| expressed protein [Arabidopsis thaliana] gb|AED92663. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Emb|CAB82953.1 1.208e-08
C-terminus
sp_v3.0_unigene34729 SustainPine v3.0 661
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene34816 SustainPine v3.0 1029
AutoFact: RNA recognition motif containing protein, putative [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.571e-09
Complete
sp_v3.0_unigene35000 SustainPine v3.0 523
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 4.0e-23
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 2.82e-07
Internal
sp_v3.0_unigene35042 SustainPine v3.0 640
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Myosin XI, putative 4.511e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain