Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25292 SustainPine v3.0 150
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene25432 SustainPine v3.0 217
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-11
• FL-Next: tr=Os07g0510800 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Os02g0309600 protein 6.823e-06
Internal
sp_v3.0_unigene25456 SustainPine v3.0 843
• AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.00018e-42
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene25509 SustainPine v3.0 250
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Orobanche cernua var. cumana RepID=Q27U10_OROCE 2.0e-15
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene25950 SustainPine v3.0 447
• AutoFact: Os06g0493000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DC29_ORYSJ 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26631 SustainPine v3.0 764
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SMM3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 5.291e-33
Putative C-terminus
sp_v3.0_unigene26875 SustainPine v3.0 277
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.13e-37
Putative Complete
sp_v3.0_unigene26997 SustainPine v3.0 903
• AutoFact: lectin-like receptor kinase 7;3 [Medicago truncatula] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.847e-35
C-terminus
sp_v3.0_unigene27035 SustainPine v3.0 1470
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative splicing regulatory protein 8.154e-12
Complete
sp_v3.0_unigene27091 SustainPine v3.0 469
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-19
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene27095 SustainPine v3.0 799
• AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transparent testa 12 protein 4.183e-10
Complete
sp_v3.0_unigene27508 SustainPine v3.0 1270
• AutoFact: receptor lectin kinase [Arabidopsis thaliana] sp|O80939.1|LRK41_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.1; Short=Arabidopsis thaliana lectin-receptor kinase e; Short=AthlecRK-e; Short=LecRK-IV.1; AltName: Full=Lectin Recepto 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 3.066e-26
Putative C-terminus
sp_v3.0_unigene27595 SustainPine v3.0 910
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.211e-19
Complete
sp_v3.0_unigene27672 SustainPine v3.0 1819
• AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 1.023e-10
C-terminus
sp_v3.0_unigene28001 SustainPine v3.0 2738
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calmodulin binding protein 2.426e-06
Complete
sp_v3.0_unigene28390 SustainPine v3.0 2353
• AutoFact: geminivirus Rep-interacting motor protein [Arabidopsis thaliana] gb|AED91547.1| geminivirus Rep-interacting motor protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene28431 SustainPine v3.0 760
• AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
Putative C-terminus
sp_v3.0_unigene28504 SustainPine v3.0 1121
• AutoFact: GBP_C multi-domain protein 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene28648 SustainPine v3.0 534
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene28954 SustainPine v3.0 689
• AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
• FL-Next: sp=Callose synthase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative callose synthase 1.679e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain