Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene187871 SustainPine v3.0 532
AutoFact: rve domain containing protein 4.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene188023 SustainPine v3.0 117
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 1.0e-11
FL-Next: tr=Gag-pol polyprotein, putative; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Reverse transcriptase 5.947e-09
Internal
sp_v3.0_unigene188107 SustainPine v3.0 327
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene188256 SustainPine v3.0 402
AutoFact: polyprotein [Glycine max] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Polyprotein 2.354e-06
Internal
sp_v3.0_unigene188439 SustainPine v3.0 716
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene188459 SustainPine v3.0 325
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.859e-23
Internal
sp_v3.0_unigene188590 SustainPine v3.0 523
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53PB2_ORYSJ 5.0e-22
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene188696 SustainPine v3.0 597
AutoFact: Flavonoid 3-hydroxylase, putative n=1 Tax=Ricinus communis RepID=B9S5P8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 3.571e-25
Internal
sp_v3.0_unigene188997 SustainPine v3.0 606
AutoFact: Phosphoinositide 3-kinase n=1 Tax=Nicotiana tabacum RepID=Q4QXM0_TOBAC 0.0
FL-Next: sp=Phosphatidylinositol 3-kinase VPS34; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphatidylinositol 3-kinase 1.293e-14
C-terminus
sp_v3.0_unigene189093 SustainPine v3.0 951
AutoFact: rve domain containing protein 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene189201 SustainPine v3.0 466
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 1.0e-34
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene189430 SustainPine v3.0 299
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7X6_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.72e-16
Putative Complete
sp_v3.0_unigene189619 SustainPine v3.0 420
AutoFact: Nucleotid_trans domain containing protein 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 7.196e-09
Internal
sp_v3.0_unigene189712 SustainPine v3.0 367
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene189881 SustainPine v3.0 346
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.588e-20
Putative C-terminus
sp_v3.0_unigene189889 SustainPine v3.0 495
AutoFact: RVT_1 domain containing protein 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.173e-15
C-terminus
sp_v3.0_unigene190468 SustainPine v3.0 325
AutoFact: Heat shock protein 90 (Fragment) n=1 Tax=Chromera velia RepID=D9J1W2_9ALVE 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 8.464e-30
C-terminus
sp_v3.0_unigene190884 SustainPine v3.0 336
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 1.692e-10
Putative C-terminus
sp_v3.0_unigene190934 SustainPine v3.0 333
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Os08g0344700 protein 8.772e-06
Internal
sp_v3.0_unigene191015 SustainPine v3.0 795
AutoFact: Obg-like ATPase 1 n=2 Tax=Protacanthopterygii RepID=C0H944_SALSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 4.646e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain