Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167162 SustainPine v3.0 291
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative N-terminus
sp_v3.0_unigene167226 SustainPine v3.0 218
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-17
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene167291 SustainPine v3.0 309
AutoFact: polyamine oxidase [Nicotiana tabacum] 7.0e-31
FL-Next: sp=Polyamine oxidase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyamine oxidase 1.87e-22
Internal
sp_v3.0_unigene167370 SustainPine v3.0 239
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.289e-40
Putative Complete
sp_v3.0_unigene167374 SustainPine v3.0 134
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 2.0e-10
FL-Next: tr=Gypsy/Ty3 element polyprotein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pol protein integrase region 9.863e-29
Internal
sp_v3.0_unigene167444 SustainPine v3.0 228
AutoFact: putative MATE efflux family protein [Oryza sativa Japonica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transparent testa 12 protein 6.039e-10
Internal
sp_v3.0_unigene167446 SustainPine v3.0 233
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-19
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene167447 SustainPine v3.0 235
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-18
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene167523 SustainPine v3.0 286
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-21
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene167531 SustainPine v3.0 115
AutoFact: Flavin containing polyamine oxidase n=2 Tax=Hordeum vulgare RepID=Q93WC0_HORVU 2.0e-11
FL-Next: sp=Polyamine oxidase; Zea mays (Maize). 0.0
Sma3: Polyamine oxidase 6.864e-08
Internal
sp_v3.0_unigene167557 SustainPine v3.0 275
AutoFact: root hair specific 2 [Arabidopsis thaliana] gb|AAF78500.1|AC012187_20 Strong similarity to an unknown protein orf4 gi|1402878 from Arabidopsis thaliana 81kb genomic sequence gb|X98130 and is a member of an uncharacterized membrane protein PF|01554 family. 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 1.725e-36
Internal
sp_v3.0_unigene167588 SustainPine v3.0 183
AutoFact: Phosphoinositide 3-kinase n=1 Tax=Nicotiana tabacum RepID=Q4QXM0_TOBAC 9.0e-16
FL-Next: sp=Phosphatidylinositol 3-kinase, nodule isoform; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Phosphatidylinositol 3-kinase 9.073e-23
Internal
sp_v3.0_unigene167630 SustainPine v3.0 139
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 3.0e-11
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene167713 SustainPine v3.0 227
AutoFact: Os02g0712700 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DY65_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 2.661e-29
Internal
sp_v3.0_unigene167733 SustainPine v3.0 276
AutoFact: Unassigned protein
FL-Next: tr=Os08g0273000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Polyprotein 8.404e-07
Putative C-terminus
sp_v3.0_unigene167882 SustainPine v3.0 165
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein 1.852e-08
Internal
sp_v3.0_unigene167908 SustainPine v3.0 300
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 6.177e-38
Internal
sp_v3.0_unigene167928 SustainPine v3.0 211
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb06g013680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene167934 SustainPine v3.0 264
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 5.352e-08
Putative C-terminus
sp_v3.0_unigene167950 SustainPine v3.0 267
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 1.0e-23
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain