Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-dependent DNA replication

Term: GO:0006278  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11049 SustainPine v3.0 629
AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene11137 SustainPine v3.0 778
AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene11201 SustainPine v3.0 3313
AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Dentin sialophosphoprotein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene11240 SustainPine v3.0 3090
AutoFact: putative PDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative Complete
sp_v3.0_unigene11740 SustainPine v3.0 1271
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=E0CQU0_VITVI 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative prolyl endopeptidase 8.35e-09
C-terminus
sp_v3.0_unigene11811 SustainPine v3.0 1356
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene11907 SustainPine v3.0 2444
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene11976 SustainPine v3.0 720
AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene11987 SustainPine v3.0 562
AutoFact: Contains PF|00787 PX (phox) domain [Arabidopsis thaliana] 3.0e-25
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene12013 SustainPine v3.0 1342
AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Sma3: Cinnamoyl-CoA reductase 0.0
Complete
sp_v3.0_unigene12224 SustainPine v3.0 2575
AutoFact: glycerol-3-phosphate permease like protein [Arabidopsis thaliana] emb|CAB78758.1| glycerol-3-phosphate permease like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative glycerol 3-phosphate permease 4.145e-13
Complete
sp_v3.0_unigene12265 SustainPine v3.0 2603
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HECT 2.121e-09
Complete
sp_v3.0_unigene12574 SustainPine v3.0 2041
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 3.60134e-43
Complete
sp_v3.0_unigene12777 SustainPine v3.0 6467
AutoFact: putative leucine rich repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene12983 SustainPine v3.0 922
AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 2.617e-08
C-terminus
sp_v3.0_unigene13065 SustainPine v3.0 2381
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Brca1-associated protein, putative 8.35e-09
Complete
sp_v3.0_unigene13088 SustainPine v3.0 1185
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 5.962e-27
Internal
sp_v3.0_unigene13123 SustainPine v3.0 755
AutoFact: putative casein kinase [Oryza sativa Japonica Group] gb|AAV59374.1| putative casein kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 1.176e-15
Internal
sp_v3.0_unigene13162 SustainPine v3.0 2865
AutoFact: PTEN-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Phosphoprotein phosphatase, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene13174 SustainPine v3.0 1041
AutoFact: putative casein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 3.837e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain