Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed DNA polymerase activity

Term: GO:0003964  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene22123 SustainPine v3.0 3848
• AutoFact: pfam00665, rve, Integrase core domain 1.0e-21
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Complete
sp_v3.0_unigene22145 SustainPine v3.0 330
• AutoFact: pfam00067, p450, Cytochrome P450 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 1.62e-10
Internal
sp_v3.0_unigene22146 SustainPine v3.0 670
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene22156 SustainPine v3.0 1286
• AutoFact: Cinnamyl alcohol dehydrogenase n=1 Tax=Eucommia ulmoides RepID=Q506M2_EUCUL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamoyl-CoA reductase 1.59748e-43
Complete
sp_v3.0_unigene22290 SustainPine v3.0 668
• AutoFact: geminivirus Rep-interacting motor protein [Arabidopsis thaliana] gb|AED91547.1| geminivirus Rep-interacting motor protein [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of Geminivirus Rep-interacting motor protein OS=Arabidopsis thaliana GN=GRIMP 0.0
Internal
sp_v3.0_unigene22745 SustainPine v3.0 981
• AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 2.609e-06
N-terminus
sp_v3.0_unigene22774 SustainPine v3.0 2573
• AutoFact: THO complex subunit 1 [Arabidopsis thaliana] gb|AAL11560.1|AF424566_1 AT5g09860/MYH9_7 [Arabidopsis thaliana] gb|AAL16253.1|AF428323_1 AT5g09860/MYH9_7 [Arabidopsis thaliana] gb|AED91456.1| THO complex subunit 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene22778 SustainPine v3.0 1553
• AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene22800 SustainPine v3.0 955
• AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene22941 SustainPine v3.0 1132
• AutoFact: Lipase_GDSL domain containing protein 1.0e-08
• FL-Next: sp=GDSL esterase/lipase LIP-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Alpha-L-fucosidase 2, putative 1.848e-13
Complete
sp_v3.0_unigene23025 SustainPine v3.0 3264
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 3.086e-07
Putative Complete
sp_v3.0_unigene23241 SustainPine v3.0 1516
• AutoFact: pfam01432, Peptidase_M3, Peptidase family M3 8.0e-21
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative Complete
sp_v3.0_unigene23530 SustainPine v3.0 1451
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 2.245e-07
Putative Complete
sp_v3.0_unigene23688 SustainPine v3.0 4284
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein-like 2.809e-13
Complete
sp_v3.0_unigene24261 SustainPine v3.0 1221
• AutoFact: guanine nucleotide-exchange-like protein [Arabidopsis thaliana] 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene24335 SustainPine v3.0 703
• AutoFact: Maturase (Fragment) n=1 Tax=Pinus sp. Qiu 94013 RepID=Q9T671_9CONI 0.0
• FL-Next: tr=MatR; Abies nephrolepis. Mitochondrion. 0.0
• Sma3: Maturase 0.0
N-terminus
sp_v3.0_unigene24428 SustainPine v3.0 4281
• AutoFact: DUF810 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24552 SustainPine v3.0 548
• AutoFact: Ferritin n=1 Tax=Branchiostoma belcheri tsingtauense RepID=Q6WNW7_BRABE 0.0
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Putative C-terminus
sp_v3.0_unigene24578 SustainPine v3.0 447
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 7.0e-40
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.873e-17
C-terminus
sp_v3.0_unigene25063 SustainPine v3.0 308
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 1.0e-20
• FL-Next: tr=OSJNBa0074B10.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.656e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain